Gene detail

Detailed information of aawi_s0055.g86.t1 in Acropora awi

Genomic Location: sc0000055_pilon:1288647...1296129
NR annotation: XP_029180581.2, uncharacterized protein LOC114948177 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0055.g86.t1

CTGAAGTTGTTTTTGCAGACTTCGCCAAATGGGCATGGGAATTGAATTCCGCAAATTTATCGTTGGTGGCGTTCTCTGTGGGTTGCTGCTCTTTAAGGAGGTTACCTGCCAAGGGACAAAGAACAAGAATTATGGGAACCCCAACTTCCATTTCAATAAATCCCAGCATTTACTAGACAAACGTACCACTGATGTTTCAGATGCACAAGCCATTTACGATTATTCCCAGGAATGGGTCAAATCCGAGACTACCTACTATGGTCAATATCCGGGCGGTGGTGCATGCACACTAGATCCACTCACCCCAATGGCCTCGCAAAAAGGCTGGATCCTGGTAGCCGCTGGACAATATGACTTTCTCAAATCTCTTGGCTGTGGAATGTGCGTGGAAATACGGGGGTCTGGGAAGGGCAGTGGTTTGACACCTGTCACAGGAGTCAAGAAAGCCATTGTTCACGACTTATGTGGCGCATGTAAAAAAGGGGGCTACGATCTGTATATCGACGGAGACGGCAAATGGGAAATTGAAACCAAAGCAATCGATTGTCCCAAGATTTCTGGTCCAGATGGCGAGATTACTTTCCGATTTGTCGAAAAAAATCTGTGGAGTTTTAAACTTCAAGCTCGGAATCACAAAGTTCCTGTAGCTGGCATAGAAGTAGCTAAAAATGGAAGGTACTATTGCCTAAAGAGAACTGGCGACAACTATTTTACTGGTGATGGCCTTGGGAAAATAGAAATACCACTGAAAGTGCGATTAACAGCGGTAACAGGGGAACAAAAAGAAACAGTAATTCCATTCATGTTAACTTCTGATATTCCGAGTGGTGTTCAGTTTTCTGGTTTCAAAGCAGGACCGGGTCCTTCAAGTATAATGTGCGCTGGTCAGGGTAAAAAATCGCCATATCCCCCAGACGGAATACCTATCGGCGAAGCTGCTGGACCGACACCACGTCCACCAAGCTCTACTGGGTCACCATCACCTCCCTCTACTCCACCATCGACCCCGCCGCTTCCTCCCTTGCCACCGACTACAGGAGGTGGAGGAGAAGGATTAACAGCTCCAGGGACAGCTAGTGGAGGCGGTGGAGCGGGCGCAGATGGTTTCTGTAAGGATAAGAAAGGTGTGTTCCCAGACCCCAACGACTGCGCTGGCATTATCACTTGCAACAACAACAAGGCTCACAAACAGTCATGCGCAAACCCCCTGCTCCTCAACGCCAAAAGTATGAACTGCGATCTACCATACAGAGTAGACTGTGGATCTAGACCCATAAGAAACAGCGATGCTTCAGAGAAGTGGTCTTTCGTAACGACTTTAAGGTCTTTCACAAATGCCAAGAAAAAGGAAATGATACTCTCATAAAAATGCATGTGATCATCAAAAGTGTTTCAAAAAACAGTTCGGAGACGAAGGCACGAAATCTGAAGGTCCTATGCCATGGGCGTGTCTTTCCCCATTATATCATGCATTCATGACTTCTCCCTGAAAGTTTTGTAATGGTATGAAAGCAAGGTGAAGTAAGCTTTACGAAGTCTCCCTTTTCAAGTTCATCTTCTTAACTCCAACAGCAAATTCGTTCAGATATACAAACAACAAGCGCTTAGCCTACAAAGTTATCAAAAATGCAATAGAAATACTAAAAATACTAATTTATCTGGCTATAGATATGTTTGATCAGAAATGTTATAATTCCTCTTGCTTAAGTTCGACGATTGAAATTGCTAAAAGCTCGTTTTCACCTCTTCTGAAAAACCACAATAAAGAGCTCCTTTCGACAATAATGCCAAACACAACTTTGAAAAAATGCTTAAGACGCACCACCTATTTTTGTCACGCAGTCGATTCGAGCAACAACTTTTCCTTTTCTAACGAAGAACTTCCGTTAACCATTGCTAAAACATCATCAAAGCCGTCCTCGTTATCAGCTTCTTGTTGCTGAGGTTCTAGTTCGCTTTCTTGTTGTACGGTTGTTGCCTCCACGTTACTCCACCTCCTACATGCATCCAGCTCGCCATCTCCGTTACGTTCGTGCCGAGAATAACATGCTTGACGAGCT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036908	Homologous_superfamily	RlpA-like domain superfamily	Interproscan
IPR051477	Family	Plant Cell Wall Expansin	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR036749	Homologous_superfamily	Expansin, cellulose-binding-like domain superfamily	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31836	EXPANSIN-LIKE PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan