Gene detail

Detailed information of aawi_s0063.g35.t2 in Acropora awi

Genomic Location: sc0000063_pilon:954826...965778
NR annotation: XP_029195382.1, protein phosphatase 1A-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0063.g35.t2

GTCTAGTTTGAATAAAGACTGGGGCGAGTTGACTGAAAAAGTCTGTTACACGACAAAAGCGTTTTCCGAGAAGTTTAGATGCATGTTTGACTTTCTTTCGAAATTTCATGTAATGAATCTGGGTTAATGTCCATTATTTTGAATGGGTGCATTTCTAGAAAAGCCAAAGACTGAAAAAGTGACCAAGTCGGCATCGGGAAATGGATTTCGCTACGGAGTGGCATCCATGCAGGGTTGGCGTATTGAAATGGAAGATGCACACACGGATATCACTGCATTGAATCACGAGCTCCAAGAATGGTCTTTTTTTGGTATATTCGATGGACATGCTGGGTCTAATGCAAGCCTATTTTGTGCAGAAAATCTCTTGGGATGCGTTTTATCGAGTGATGATTTTAAAGAAGCTTTAAAAAATGGGCCATCTTCTCCCGATTTGGAGCAACTCAAAAGTGGAATCAAGATGGGATTTTTTGAGCTGGATAAAACAATGCGAGAACGACCAGCCTGGTCAAACGGAGACGATAAAAGTGGTACGACGGCTGTAACAGCCATGATTACTCCTAAGGAATATATTTTTGCAAACTGTGGTGACTCTAGAGCCATTTTATGTAGTGATAAGAAAGTGACTTTCCATACCGTTGATCACAAACCCTCTAATCCCGACGAGAAAAGTCGCATCGAAAAGGCTGGAGGCAGTGTTATGATTCAAAGAGTTAACGGCTCTTTGGCAGTGTCAAGGGCATTGGGAGATTTCGAGTACAAGATGGATTTTTCAATCGATGCAGCCGAGCAACTGGTCTCACCTGAACCAGAGATTTCTGTAATTCCAAGAGATGATGAGGTCGACGAGTTCATTGTTATCGGCTGTGATGGTATCTGGGATGTGATGAGTAACGAAGAAGTGGGAGACTACATTCGCTCAAGAATGCTACTTTCTGGGGATTTAGAACTGATTTGCAGTGAGCTTCTCGATACCTGTCTCGCCAAGGGGAGCAGAGATAACATGAGTGTCATCTTAATCACGTTTGCTGGAGCGCCAAAAGTTTCAGAGAAAGCCATTTCAAAGGAGGCAGACCTTGATGCTGATTTGGAGAAAAGAACTGCTGCTGTACTTCAAAGAAACCCAGGAGGTGTTGACCTTTATTATGCCATGCACTGCTTATCAAATGAAGATATTGATGGTCTGCCTCCAGGAGGAGGACTTGCATCAAAAACATTTGACAAGTTTAGAACCTTGTATAATTACAGTAATAGAAACGAGTTATTACCAAGGTCTCCCAAGCCTCAAACAGAATGGGGAAGACTTATTTCAGAGCTTTGAATGATTAGGCTTCCCAGCCGAAATAATTGAAAAGGCCTTTGCCTGAAGCAATTGTTTAAGAAGGAGTTTCAGTAAACAAATCTTTATTCAAAAAACATTGGATAAGTTGATCGAAAAACAAACAGAAGAGTCTGATTGAGAAGGGAATCGATGCCAACAGATGACTGCTATGCTGATTTGGCGACCCTTTATTCTCTGCAGTGCAGTGTAATGTTCTGTTTATTACTATAGTAACTTCAGTATCACTTTTAAAGTTAATGTTTGCCAGGAAGTGGTTTTTGAGCGGACTTTCTACATTTGTATACTTGTAAATGGTTGCTGATGCACTCAGCAAGTGATCACACATTAAATTAGAGCAGCATTAGTTTAGTTCTATACCAGAATGAAAACAGTTTAGTAGCGTGTGTTTTCTGTTTCTCTCAAGTTACAACATACTATGGGTTGTGAAGCTGACAACGGCTACTTTGGTCAGCGGAACAGAGAGGGCCTGGCATATGCCATACGATAGTTTGCGCAAACTTAGAGCTTTCACGTCACGGTATCCTCTTCCCGTTCCACCTCTCGAAGCTGTTGTCGGTACACTTGACATGAAAATGCGTTAATTATTTGTGTGTGAATGTAGTGATACAATCACTGCGTTTATCATACCTACTCGCAGCTCTACCGCATTTTTTCTGATTAGTTCATATACAAAGCTTAACAGCATTCAATGGAAATTTGAACTTTAACGTAGCTTTCCGTTTCGTGTCATAAATCATGTATAATATCACTAACCAATGGTGTGGaatagatcatttgtatgatggcgttattttacaaccaagaccagaatgctttatcaaagtgcttccttattcaaatttgtcttatctcttgggaataaacagacctggaaaagattagcctcacaatagaggccactaacagcattctggtcttggtagtaaaatgacaccgttatgcaaatggcctattcAAAGAGTTCAAAGGGAGAATGGAAATTGGGAGAGCTACAAAGAGGAGCATGGCCTTGGGTGGTAGGGCTAAAAAAAAGAGGCTGCTAGGCACTCTTAGTGACCACTGAAGAGCATTCATGTTCTGAAACTGAAACacgacgacaacggcaacgacaaccccacaagtctatgatttgatcgattgaaccaggaaaaatatttgtgctgcacgtgcgacacgccctttcgtgcaatttttgacgtagtctgccaaattacgacgtgaaatgttcaaatttgagggtctgacgacaacgaaaacccgcagctgtaaatctttcgttctctgcctttacatgaaagccattcgtgcgaagcaaacgaaagtgtacttcgcctattttgtacaacatggaataatcgcaaaacacttaagctagccaaaagttctaagttattgtgacgttttcgttgcagcagtcgtcgttggttctcaaactccctattGTCACGAAATAACAACACTCCAAGACTGGTAATAAAGTAAACAAATCAGTGAAATTGCAGTAGAAAGTGATTAACATGCCTTCTTTGCAGAAGAAGATTCAAATTCACGTCTCTGCTATGAAAATAAATAAGCAACAAAAGG

Protein

Uniprot

Uniprot term	Description
P20650	Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1
P35814	Protein phosphatase 1A OS=Oryctolagus cuniculus OX=9986 GN=PPM1A PE=2 SV=1
P35813	Protein phosphatase 1A OS=Homo sapiens OX=9606 GN=PPM1A PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07830	PP2C_C	Protein serine/threonine phosphatase 2C, C-terminal domain	Domain	Interproscan
PF00481	PP2C	Protein phosphatase 2C	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001932	Domain	PPM-type phosphatase-like domain	Interproscan
IPR036457	Homologous_superfamily	PPM-type phosphatase-like domain superfamily	Interproscan
IPR015655	Family	Protein phosphatase 2C	Interproscan
IPR012911	Domain	Protein serine/threonine phosphatase 2C, C-terminal	Interproscan
IPR036580	Homologous_superfamily	Phosphatase 2C, C-terminal domain superfamily	Interproscan
IPR000222	Binding_site	PPM-type phosphatase, divalent cation binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13832	PROTEIN PHOSPHATASE 2C	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004722	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0004721	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0030145	Molecular Function	manganese ion binding	Interproscan
GO:0043169	Molecular Function	cation binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04461	PPM1B, PP2CB; protein phosphatase 1B	EC:3.1.3.16	Protein phosphatases and associated proteins	ko01009	deepkoala