Gene detail

Detailed information of aawi_s0065.g75.t1 in Acropora awi

Genomic Location: sc0000065_pilon:752071...756344
NR annotation: XP_015754204.1, PREDICTED: general transcription factor IIF subunit 2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q03123	General transcription factor IIF subunit 2 OS=Xenopus laevis OX=8355 GN=gtf2f2 PE=2 SV=1
Q8R0A0	General transcription factor IIF subunit 2 OS=Mus musculus OX=10090 GN=Gtf2f2 PE=1 SV=1
Q01750	General transcription factor IIF subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2f2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02270	TFIIF_beta	TFIIF, beta subunit HTH domain	Domain	Interproscan
PF17683	TFIIF_beta_N	TFIIF, beta subunit N-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR040450	Domain	TFIIF beta subunit, HTH domain	Interproscan
IPR040504	Domain	TFIIF, beta subunit, N-terminal	Interproscan
IPR011039	Homologous_superfamily	Transcription Factor IIF, Rap30/Rap74, interaction	Interproscan
IPR003196	Family	Transcription initiation factor IIF, beta subunit	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10445	GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006367	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0005674	Cellular Component	transcription factor TFIIF complex	Interproscan
GO:0006366	Biological Process	transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03139	TFIIF2, GTF2F2, TFG2; transcription initiation factor TFIIF subunit beta	EC:5.6.2.-	Transcription machinery	ko03021	deepkoala