Detailed information of aawi_s0066.g44.t2 in Acropora awi

Genomic Location: sc0000066_pilon:1065246...1155027
NR annotation: XP_044184188.1, LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q15751Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00622SPRYSPRY domainFamilyInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051625FamilyDiverse Signaling and Regulatory Domain-Containing ProteinInterproscan
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR035768DomainHERC1, SPRY domainInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR000569DomainHECT domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22872BTK-BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10594HERC1; E3 ubiquitin-protein ligase HERC1EC:2.3.2.26
Ubiquitin systemko04121deepkoala

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