Gene detail

Detailed information of aawi_s0070.g29.t1 in Acropora awi

Genomic Location: sc0000070_pilon:878590...892101
NR annotation: XP_044168820.1, uncharacterized protein LOC122953043 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aawi_s0070.g29.t1

ATGCTCCGCCCTATTCGATTAAATGCGGGCTTGGAAAATCCACCAGAAGCATACTACAATAATATGCCCGAATCTGCAAAAAAAGTTATAAAAATGGGGGTGGATTTTCGAAAGAGTGAAATGTCAGAATTTAGTGATAAGATGGAGAAGGTAATTCAGCAGCAGCGGCGAGACTGCGAATCAGCTGTGATAAACAGAGGTCCGTATGCCCAGGCCGATGAGTTTCTACATCTGCAAATGTCTCCCGACAAATGGTTCTCCCTGAATGCTCGTCAGCGGGAGAGCCATTTGAAAAAGTTCTGGGCAGAAGTACCGGCAAAAAATGAAGGTGTACAAGGCCAGAATGATGACAACGATGCTACGGAAGATGCCACTTCCCTCAACATTCAGCTGTCTGTGAGTGCCGAGGAGTCGGGTGTAGCTGGTGTAGCACTTCTTTCTCTGAAGGAGATGTTTCGACAGGCAGCCATTCTTCTCGGTAAGAAGGATTCCATTATGGAAATACCGTTCAAGCCACCCACTTTCATGGTCGAGAGCGACAGGGGAAGGCCGCACTACGTCGTGAGGTCAGAAAGTGGCAAGGTAACGTGTGATGACTGTCCTCGCTATAAAGTCTGGAAAGaaatcggtgatcgtggcggagaaggaagagcttatggaaatcttggcagtgcttttcagtcactgagtgactatcgaaaaagcattgagtatcaagaaaagcgattgaacattgcaatagaagtcggtgaccgggatggagaaggaaaagcctatggaaatctcggcaatgcttaccattcactgggtgaatatcgaaaagccactgagtactttgaaaaagcattaaaaactgcaatggaaatcggtgatcgtcgtggagaaggaggagcctacggaaatctcggtaatctcaacgactcgctgggtgactgtcaaaaagccattgagtatcacgaaaaacatttgaaaattgcaatagaagtcggtaattttgatggagaaggaaacgcctatggaaacctcggtaatgcttaccaatcagttggtgactataggaaagccattgagtataatgaaaaagcgttgaaaattgcagtagaaatcggtgatcgggccggagaaggaagagcttgtggaaatctcggtagtgcttatcgggcactgggtgactatcgaaaagccattgattatcatgaaaaacggctgaaaattgtaaaagaaatcggtgatcgtcggggagaaggagaagcctatggaaatctcggtaatgcttaccagtcgctcagtgactatcgcaaagccactgagtatcatgaaaaacattTaaaaattgcattgaaaatcggtgatcgtgccggagaaggagaagcctatgggaatctcggcaatgcttaccatttactgggtgactatcgaaaagcccttgaatatcatgaaaaacgactgaaaattgcaaaagaaatcggtgatcgggcgggacaaggagaagcttatcataacattggaaatgcatattcttctcttgaacaattcgaaaacgcggtggattattttgtttccgctgtggatgccttcaattctttgagatctcttttgaagtcacaagataattggaaagtaacgtttcgtgagcagcacgagacgacgtacactgccttatggaggtccttgattagaagtgaaaagttcgatgaggctttgtttgcggctgagcaaggaAgagcgcagactttgtctgacaatttgttgattcaatataaactaCctacgtccttatcagctgccctaaccgacaccaaagaaacagtatctcgcctcttcacagagcgttctacaccaactatttttctagaAactgaAggacgtaccgtttacatctggtttctgagcaaggaaaacaaagttgcatttcgaagaggaaggctagtgggtgatagaagagagagagatcccatacacGccTtGctgcgatcatctttagagaaaatagaagctgcaGctagtgcaagaagtgatcgcgcatctgaAtttagcacgaaaCGGTAG

Transcript

aawi_s0070.g29.t1

CCCTCGTTTCACGAATACATCTGTGAAAAGGCAACAATGATTCAAGACAACATGCTCCGCCCTATTCGATTAAATGCGGGCTTGGAAAATCCACCAGAAGCATACTACAATAATATGCCCGAATCTGCAAAAAAAGTTATAAAAATGGGGGTGGATTTTCGAAAGAGTGAAATGTCAGAATTTAGTGATAAGATGGAGAAGGTAATTCAGCAGCAGCGGCGAGACTGCGAATCAGCTGTGATAAACAGAGGTCCGTATGCCCAGGCCGATGAGTTTCTACATCTGCAAATGTCTCCCGACAAATGGTTCTCCCTGAATGCTCGTCAGCGGGAGAGCCATTTGAAAAAGTTCTGGGCAGAAGTACCGGCAAAAAATGAAGGTGTACAAGGCCAGAATGATGACAACGATGCTACGGAAGATGCCACTTCCCTCAACATTCAGCTGTCTGTGAGTGCCGAGGAGTCGGGTGTAGCTGGTGTAGCACTTCTTTCTCTGAAGGAGATGTTTCGACAGGCAGCCATTCTTCTCGGTAAGAAGGATTCCATTATGGAAATACCGTTCAAGCCACCCACTTTCATGGTCGAGAGCGACAGGGGAAGGCCGCACTACGTCGTGAGGTCAGAAAGTGGCAAGGTAACGTGTGATGACTGTCCTCGCTATAAAGTCTGGAAAGaaatcggtgatcgtggcggagaaggaagagcttatggaaatcttggcagtgcttttcagtcactgagtgactatcgaaaaagcattgagtatcaagaaaagcgattgaacattgcaatagaagtcggtgaccgggatggagaaggaaaagcctatggaaatctcggcaatgcttaccattcactgggtgaatatcgaaaagccactgagtactttgaaaaagcattaaaaactgcaatggaaatcggtgatcgtcgtggagaaggaggagcctacggaaatctcggtaatctcaacgactcgctgggtgactgtcaaaaagccattgagtatcacgaaaaacatttgaaaattgcaatagaagtcggtaattttgatggagaaggaaacgcctatggaaacctcggtaatgcttaccaatcagttggtgactataggaaagccattgagtataatgaaaaagcgttgaaaattgcagtagaaatcggtgatcgggccggagaaggaagagcttgtggaaatctcggtagtgcttatcgggcactgggtgactatcgaaaagccattgattatcatgaaaaacggctgaaaattgtaaaagaaatcggtgatcgtcggggagaaggagaagcctatggaaatctcggtaatgcttaccagtcgctcagtgactatcgcaaagccactgagtatcatgaaaaacattTaaaaattgcattgaaaatcggtgatcgtgccggagaaggagaagcctatgggaatctcggcaatgcttaccatttactgggtgactatcgaaaagcccttgaatatcatgaaaaacgactgaaaattgcaaaagaaatcggtgatcgggcgggacaaggagaagcttatcataacattggaaatgcatattcttctcttgaacaattcgaaaacgcggtggattattttgtttccgctgtggatgccttcaattctttgagatctcttttgaagtcacaagataattggaaagtaacgtttcgtgagcagcacgagacgacgtacactgccttatggaggtccttgattagaagtgaaaagttcgatgaggctttgtttgcggctgagcaaggaAgagcgcagactttgtctgacaatttgttgattcaatataaactaCctacgtccttatcagctgccctaaccgacaccaaagaaacagtatctcgcctcttcacagagcgttctacaccaactatttttctagaAactgaAggacgtaccgtttacatctggtttctgagcaaggaaaacaaagttgcatttcgaagaggaaggctagtgggtgatagaagagagagagatcccatacacGccTtGctgcgatcatctttagagaaaatagaagctgcaGctagtgcaagaagtgatcgcgcatctgaAtttagcacgaaaCGGTAGGCTCTGCTACATTAAGCCAGCACTATTTAGAACATAATAATGCGGCAAAAGCATCGAGCATAATGTCAGCATTTCATCAAGATTATTGTATCACTAAAAAGGAAAAGTTTGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000132	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0001965	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0005092	Molecular Function	GDP-dissociation inhibitor activity	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan