Gene detail

Detailed information of aawi_s0076.g63.t1 in Acropora awi

Genomic Location: sc0000076_pilon:1060577...1073440
NR annotation: CAH3030214.1, unnamed protein product [Porites evermanni]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6NS26	Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus laevis OX=8355 GN=cdkal1 PE=2 SV=1
Q6P4Y0	Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus tropicalis OX=8364 GN=cdkal1 PE=2 SV=1
Q5VV42	Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Homo sapiens OX=9606 GN=CDKAL1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01938	TRAM	TRAM domain	Domain	Interproscan
PF00919	UPF0004	Uncharacterized protein family UPF0004	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038135	Homologous_superfamily	Methylthiotransferase, N-terminal domain superfamily	Interproscan
IPR002792	Domain	TRAM domain	Interproscan
IPR007197	Domain	Radical SAM	Interproscan
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan
IPR013848	Domain	Methylthiotransferase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11918	RADICAL SAM PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0035598	Molecular Function	N6-threonylcarbomyladenosine methylthiotransferase activity	Interproscan
GO:0035600	Biological Process	tRNA methylthiolation	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0035596	Molecular Function	methylthiotransferase activity	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan