Detailed information of aawi_s0083.g46.t1 in Acropora awi

Genomic Location: sc0000083_pilon:644108...656711
NR annotation: XP_029196727.2, ATP-dependent RNA helicase HAS1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K363ATP-dependent RNA helicase DDX18 OS=Mus musculus OX=10090 GN=Ddx18 PE=1 SV=1
Q9NVP1ATP-dependent RNA helicase DDX18 OS=Homo sapiens OX=9606 GN=DDX18 PE=1 SV=2
Q9VD51Probable ATP-dependent RNA helicase pitchoune OS=Drosophila melanogaster OX=7227 GN=pit PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13959DUF4217Domain of unknown function (DUF4217)DomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025313DomainDomain of unknown function DUF4217Interproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR044773DomainDDX18/Has1, DEAD-box helicase domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24031RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13179DDX18, HAS1; ATP-dependent RNA helicase DDX18/HAS1EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

TOP