Gene detail

Detailed information of aawi_s0089.g157.t1 in Acropora awi

Genomic Location: sc0000089_pilon:1934459...1940711
NR annotation: XP_029199165.2, clustered mitochondria protein homolog [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0089.g157.t1

NTTATTATTTCATTATTAATCATTCACTTCATTGCTTCTTGCTAGGTTCACCTTGCCCTCTATTGTCACAATGCTGGCCTGGCATCTGTGGCTTTGAAGCTGATGTATCGAGCAAGGTACTTGGCTCTTGTTGTGTTTGGAGAAGGCCACCCTGACATGGCTACCTTTGATAGCAATATTGGCCTCATTCTGCATGGCCAAAGGGAGTTCAAGATTTCAGAAATGTTTTTAGAGAAGGCTTTGGATGTGCAACTGAAGTACCATGGTTCAGAAAGTGTTCATACAGCCATGAGTTTTCACCTTGTAGCGAGGGCAAAGGCCTGCATTAGCGATTATAGAGCAGCACTTAATGCAGAAAAAACTGCATTCGCCATTTACAGCAGCAAGTTTGGTGAATCAGACAGCCGCACACGGGAGAGCTCCGAATACCTCAAGCATTGCACTCAGCAAGCAGTTATTATGCAGAAAAAACTGAATGAAATTTGTGGAAAAGGGACAATCAAAGCAGCAGAAAATAGGAAACCTGCAGGGCACATGTCTGCAGCAGTGTTACCTCAAGATAAGGAAAACATCTCTCATTTGATGGGCTACTTAACTGGACTCCAGGGAGTGCACCCAGCGAGCACATCATCTATCAAGGACATTGCCTCTGAAGTGAAAAAGACTCCTAAAGATGAAGCTCAGGCCTTAGTGAAAGGTCAAGAATCTGAAGTTTTGGAGGAGATGGATTGACAGCGGTGGGGCTGTGAATAGTCTTATCATCTGCAGACAACAGCAAGAAAAATTGAATTTTTAATGATGCAGGTCTCTGCATAGCTTGTTAAATGACATTGTTTTAATGTCAACAGTTCTTTGGGACCATTTTGGGGACTATTGTGTATGTGCGTTCCTTTAAGAAGGGTTAGAATTCAGGAAATAGGTTGGAAAAGGTCTCTGTGGTAGAGGCATGCTAAAGAAAATGGTGTAATGTTATAGAATAGGGTTAGAGGAACTTGCCCAATGAATATACTGTTTTTATTATTGTATGTAGCTCAGGGAAGATAGGTATTATTGAGCAAATGCACAATTCATTGGATGGAGTTCATTATCTTTTAATAAGACTTTTTGAAGCGGTATTTCATAAGTTCACAATCAGCACTGAACTTGGTTTTATATGGATGCAGTTGCCTCCATTACCAAAGACTTAACTAACAGTAGGGAGCTTAAGAAGCAGTGATGACATCAGCAAGTGATACTTCTTGCAATGGCACAAATTAATGATAGGATGAGCTAAAAGCAGCAGAGTAATTTTACCTCTGATGTAGAGTTTCACTTCTATGACACAGGTAAAATTTTTACCCCTTGACTTCAATCTATTCGTGTCAATTCAATTTTATGAAACTTTTTTTGCATTGTACAAATTATGTATAATATATAGACTTTGAAATAACCATGAGGCATGGTCTTGATATTGCAAGAACATTAGTTTTTCTAGGAATGTTTCATTGTTTTGCCATCATTTCATCATAAGCTCCCCTATACATGACACAGCTTGAAATAAAGTCCAGTTTGAATTTGAGGAAAATTACATGACAGCAAAGATTACAACCACCGCAAGTTCTTGTCAGAAGTTATCATAATGATCACTATTTTATTGTTAGCATCGGAGGAGTTGGTTATGTCAAGACAGATGGGCTCTTGAGTGAAATTTATACCATTTTCTGTGGTAATATTTTTGCAAAAAGGTGAAGATGGCATGAGAACTCCAAGCACCCTTCATTCACCTTTTACCTTCTTTTTCTCAAAGTCAGACATTCCATTTTTCACCATTAACTTTTTTCATTATTTGTCTGAAGAGATGTGTGCATAAGCTTTAATATCTTCCGTTTTTATTGTGTTTGTTAATTATTGTCAAAAAATCAAAAAAGATCACAAGAGGATGGTAGGAGAGGAGTTTTCACTAGTTCATTCAATAACCTTCACCTTGGCAAACCATTTAGAACAGATAACTTTAGCAAATTGAAGTCTCAGTGACTAGCAATTTTATCCAGGTGTTTTTTAAATTGTACTTTTGAATGAGGTTTAAATGGAATTGTCTGCTAAACCGCCTTACAAATATTGCAAACTGGAAAGGAGCATTGATAATAATAATATTATTCTTATTAAAGTAAGTAAAAAGGC

Protein

Uniprot

Uniprot term	Description
Q17N71	Clustered mitochondria protein homolog OS=Aedes aegypti OX=7159 GN=AAEL000794 PE=3 SV=1
B0W2S0	Clustered mitochondria protein homolog OS=Culex quinquefasciatus OX=7176 GN=CPIJ001445 PE=3 SV=1
Q0IHW8	Clustered mitochondria protein homolog OS=Xenopus tropicalis OX=8364 GN=cluh PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR027523	Family	CLU domain containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12601	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006996	Biological Process	organelle organization	Interproscan
GO:0048312	Biological Process	intracellular distribution of mitochondria	Interproscan