Detailed information of aawi_s0091.g66.t1 in Acropora awi

Genomic Location: sc0000091_pilon:1072820...1133431
NR annotation: XP_044163998.1, uncharacterized protein LOC114961314 isoform X3 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B2GV50DNA-binding protein RFX2 OS=Rattus norvegicus OX=10116 GN=Rfx2 PE=1 SV=1
P48379DNA-binding protein RFX2 OS=Mus musculus OX=10090 GN=Rfx2 PE=1 SV=2
Q4R3I8Transcription factor RFX3 OS=Macaca fascicularis OX=9541 GN=RFX3 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyRFX
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF02257RFX_DNA_bindingRFX DNA-binding domainDomainInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR039779FamilyRFX-like DNA-binding proteinInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR003150DomainDNA-binding RFX-type winged-helix domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12619RFX TRANSCRIPTION FACTOR FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

TOP