Detailed information of aawi_s0093.g56.t1 in Acropora awi

Genomic Location: sc0000093_pilon:843727...885106
NR annotation: XP_044177893.1, nucleotide-binding oligomerization domain-containing protein 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
C6FG12Protein NLRC5 OS=Ictalurus punctatus OX=7998 GN=nlrc5 PE=2 SV=1
D4A523NACHT, LRR and PYD domains-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Nlrp3 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF12534Pannexin_likePannexin-like TM region of LRRC8FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051261FamilyNOD-like receptor (NLR)Interproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR021040DomainLRRC8, pannexin-like TM regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP