Genomic Location: sc0000093_pilon:1046088...1056416
NR annotation: XP_015756929.1, PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Acropora digitifera]
| CDS | |||||
| aawi_s0093.g64.t1 | |||||
| Transcript |
| aawi_s0093.g64.t1 |
| Protein |
| aawi_s0093.g64.t1 |
| Uniprot term | Description |
|---|---|
| Q5FW05 | Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE=2 SV=1 |
| Q05AW7 | Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 SV=1 |
| Q803X1 | Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=7955 GN=ctu1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01171 | ATP_bind_3 | PP-loop family | Family | Interproscan |
| PF16503 | zn-ribbon_14 | Zinc-ribbon | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011063 | Domain | tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal | Interproscan |
| IPR000541 | Family | Cytoplasmic tRNA 2-thiolation protein 1 | Interproscan |
| IPR035107 | Family | tRNA thiolation protein, TtcA/Ctu1 type | Interproscan |
| IPR032442 | Domain | Cytoplasmic tRNA 2-thiolation protein 1, C-terminal | Interproscan |
| IPR014729 | Homologous_superfamily | Rossmann-like alpha/beta/alpha sandwich fold | Interproscan |
| IPR020554 | Conserved_site | Uncharacterised protein family UPF0021, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11807 | ATPASES OF THE PP SUPERFAMILY-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000049 | Molecular Function | tRNA binding | Interproscan |
| GO:0002143 | Biological Process | tRNA wobble position uridine thiolation | Interproscan |
| GO:0002144 | Cellular Component | cytosolic tRNA wobble base thiouridylase complex | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0002098 | Biological Process | tRNA wobble uridine modification | Interproscan |
| GO:0034227 | Biological Process | tRNA thio-modification | Interproscan |
| GO:0008033 | Biological Process | tRNA processing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14168 | CTU1, NCS6; cytoplasmic tRNA 2-thiolation protein 1 | EC:2.7.7.- | Transfer RNA biogenesis | ko03016 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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