Gene detail

Detailed information of aawi_s0100.g7.t1 in Acropora awi

Genomic Location: sc0000100_pilon:164504...177485
NR annotation: XP_015776083.1, PREDICTED: neuroblastoma suppressor of tumorigenicity 1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0100.g7.t1

TTTCATTGATTTGCATCTCCTTGACGAAAAGAGAAAATGATGACGCCTTCGTCAAAGTTTGCCTTTTCTGGGAGGTTATTTACAAAGAAAGCCAAGGACACGAAATAGAAAGGAAGAAGCAGCTGAGCAAAATCAAAATAAAAGAGTTATGGACAGTAGAACACTTGCTATGTTTTATATCTTCACAATTCTCTCATTGAATAGCGTCAACGCTCGGGAAAAAAGCCCTCGACTTAGTTCCCTTCCTCTTTACAATGGTGTTAAAAGCTGGTGCAGATCAGTGGAGATACAGCATTCCATACAGGAACCTGGATGTGAAACAAAAGTGATCGAAAACAGGGCCTGCATGGGGCAATGTTTCTCTTACTACGCGCCAGGAACACACCCACGGAAGGACCTATCGGATAAAAGAATGAAATATTGCGATATGTGCAAACCATCGCTAAAGAGTTGGACCAAAGTTAGTCTAGACTGCCCCGGGACCAATCACGGACAAGTCGACAAACTTGTGGAGATTATCTACAGCTGCACATGTCAAAAATGCATCAAGGATCTCAAACAGGGCTGATGAGCTAAGACTTTGACTCAACGTCTAATAATTGCCTAAAAGTAGTCATTCACAGGCCTTTGAGCCTGTTTCTTAGTTACGAGTAAGAGATAATTTTGGGTTCTAAAAGAATACTGCCGGACCAAAAAGGCTGTGAGAAAGCAGTCTCGTTCTCAAGAACTCTCCTTTGGCTTTTGGGATAAGAGGTCAAGGGGACGTTCTGGGATAGAGGTCAGCGGAAAAGCATTGAGTATAGTTTAACTAGCTCAGTACATTAACAGATTCCGCCGATTGGATAAGCACGTGATCACGTTATTGCCGTGCTTGCAAGTTTTCTCATAGTCATGGTTAGTTTTAGATCTATACTTAAATGCTCCTGTGTGGTAGCCATCCTTAGAAGTCATGTCTGCCAACGACTTTGGACAAATGTTGTTCTCCGTAACCAGCACAACTTAGGACAGAATTTTGCTTATTAATAAGGGcgcgttcgtttgggatcaatccggaataacactaattggaacaatgcgagtaagcgtttttagggagctattctcattccggaatacctggatttccattccggcaattctgctcccaagagcagaatagccgggatatattccggaatatattcttattccggaatatcccaaacgaacgcGCCCTTAGTGTTTTGGCTCGGGCTGTTCACTGTTCACTAGTTGTCCTAACTACTTCGTCCAGACATAGCAGCTACCCTCCCATGAATTTGCGTTCCATTAGCTTGAGAGAGAGTTAGAGTTGCAGTCAGGGTTGGATTCATTGTTCAGTGAGTGTACGTTTTCAAGTAGAGTACCTGATAGTTTATTTGTGTTTCAAAGGCTAACTTGCAAATTGGCTTCGCTTCCAGAAGAAATTCTCATTCGCGCTTGCATCCACCCTCTTTCGTGTTTCCTTTTTTTTCTATTTGGTGTTGAGCCAAAAATCTATTGGGCTTCCTCTTTTAGATGGGATTTCCGACTTTCagcgagtaaccctgtagcttttcagagctctatcgttactggttcccatgacctgtagcttcttttattaccatggttagaggtatcgttagtgttgtatcatctgctgtttcgttcctcaatcacagatctagtctggtagggtacaGGGTCGCTTACTTCAAGGCAAAGGTATAGCTTTGTACCACCACTTATCTAGTTCCAGGATTGCTTTTCGAGCTTTTCGCGATGTTAGGTTATGTTAAGGAGAGAAGGTTTAGGGACACTTAGTAAAATGACGTTTAATGAAAGAAATAGTGTGCTCTTTACAATTGTGCATGACGCTGGGGGCCGCGGTGTAGCAACGCTTATCTTACTTATTTATTACATTTCTTCGGCTACATGTCGTTATAATTAATAAAAACTGTATCTGTAAACTTTTTATTGTTCTTGAAATGGGCGGGCCCAGCTAGCAGAAATGAAATTTTCTAAGATTTGTTGCTTTCAACGTTGGGAACTAAATGTAGACAATATTTTTTCAAACTTATCAACACGTAACCTATTTGGAGGTTCTCAAATAAATGCTACCTCAAAAT

Protein

Uniprot

Uniprot term	Description
Q6DF53	Neuroblastoma suppressor of tumorigenicity 1 OS=Xenopus tropicalis OX=8364 GN=nbl1 PE=2 SV=1
Q90YC9	Neuroblastoma suppressor of tumorigenicity 1 OS=Gallus gallus OX=9031 GN=NBL1 PE=2 SV=2
O73753	Neuroblastoma suppressor of tumorigenicity 1 OS=Xenopus laevis OX=8355 GN=nbl1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03045	DAN	DAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029034	Homologous_superfamily	Cystine-knot cytokine	Interproscan
IPR004133	Domain	DAN	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15283	GREMLIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0009887	Biological Process	animal organ morphogenesis	Interproscan
GO:0036122	Molecular Function	BMP binding	Interproscan
GO:0038098	Biological Process	sequestering of BMP from receptor via BMP binding	Interproscan
GO:0048018	Molecular Function	receptor ligand activity	Interproscan