Detailed information of aawi_s0102.g5.t1 in Acropora awi

Genomic Location: sc0000102_pilon:244636...259459
NR annotation: XP_029187665.2, PDZ and LIM domain protein 7-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q62920PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2
Q8CI51PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=4
Q96HC4PDZ and LIM domain protein 5 OS=Homo sapiens OX=9606 GN=PDLIM5 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR050604FamilyPDZ and LIM domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24214PDZ AND LIM DOMAIN PROTEIN ZASPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001725Cellular Componentstress fiberInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0031941Cellular Componentfilamentous actinInterproscan
GO:0051371Molecular Functionmuscle alpha-actinin bindingInterproscan
GO:0061061Biological Processmuscle structure developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19867PDLIM5_6_7; PDZ and LIM domain protein 5/6/7-Domain-containing proteins not elsewhere classifiedko04990deepkoala

TOP