Detailed information of aawi_s0102.g50.t2 in Acropora awi

Genomic Location: sc0000102_pilon:1002862...1013060
NR annotation: XP_029187704.1, APOBEC1 complementation factor-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NQ94APOBEC1 complementation factor OS=Homo sapiens OX=9606 GN=A1CF PE=1 SV=1
Q5R9H4APOBEC1 complementation factor OS=Pongo abelii OX=9601 GN=A1CF PE=2 SV=1
Q5YD48APOBEC1 complementation factor OS=Mus musculus OX=10090 GN=A1cf PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF14709DND1_DSRMdouble strand RNA binding domain from DEAD END PROTEIN 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR006535FamilyHnRNP R/Q splicing factorInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR044461DomainA1CF, double-stranded RNA binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21245HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24978A1CF; APOBEC1 complementation factor-Messenger RNA biogenesisko03019deepkoala

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