Gene detail

Detailed information of aawi_s0104.g7.t1 in Acropora awi

Genomic Location: sc0000104_pilon:92226...101790
NR annotation: XP_029189389.2, amiloride-sensitive amine oxidase [copper-containing]-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0104.g7.t1

CCAGAGCATGGGAAACGGCAAGACGTCAAGCAAACATGATTGATGGAAGAGAAGGAACGTCGAGCGTGAATTTGGTCCAGCACAGAAAAAGCAAAGGAAAATCAGGAGGGCAAGCCACACACAAATGCTATGCATGTGGGATGCCAGGGCATTTCGCACGTGACAAGGTGTGTCCTGCGAGGGGTAAAGTGTGCGCAAAGTGCGGTAGAAAGGGGCACTGGGCAATATGTTGCAGGCATGAAGCGGATGGAAAGCAGAGCAAGACCGGTGGAAGAGCTAGTGGGAGTAATAGTCATCAAAAAAGCAGTGTTAGATGCAAACCAGCGCTAAGGCCCAAGCAGCAAATCAATCAAGTGGAATATGATAGTGAAGATGAGCCTTTCTCTTTTCCAGTAAACTTTAGTGGGGAAACAGCATGTGAAGATAACATTGTAGCAGTGAAGATCAATGGTACAGCTACTAAGATGCTTGTTGATTCTGGGGCGCAGTTTACTGTACTTGGTGAGCGGACAGACAATGTCACATTGATCGTGGTGACGACTAAAGGCAAGAGAGAAGCCTTGGGGGATAGAACGTCGTCTCGACAGCAGGATGATTGTCCTGACGCAACCAAGTTATCTGCTTCACCAGTTCGTTCAGCAGGGCTTTATGACGATTTATCAAAGGACGAGATCGTTGCTGTGAGAGATTACATTCTTCAACAGCCGTCACTTAATCTCACGGCTTATGAGAATGCCGCCCTCAACGACAACTATATTTTCTTGATCGAGTTGAAGCAGCCACCCAAAGACAAAGCACTCGATTTTCTGGACCATGAAAATGTACCTAAACCTGAGCGTACCGCTAGAGTAGTTATTTACAATGGAGGAAAGAAACCACCCATAGTGAGCGAATATTTGGTGAGTCCTGCGGGAAACCCGATACGATATCAAGAAACACGAGGCCCTGGACAGAAATATCCCATTCCATTCGATATGCGAGCAACGGATGGAAAAGAGGCCGAAGTCACGGAACGCATTGTGTCAAATGCAGCGAAGCAAGCAAACAAGCTTCTGCGGGAAAGCTACGATGGCTATACATACGATGGCTGCACGGATCGCTGTTTAACATGGTCTGATTCTGGTCCAGGAGAATTTGGAAAGCGAGGAAAATGGATTTGGTTCTAGCGAGATCTCCAAGGCAACTATGTACAACCGGTCGGATTTGAATTGTACCTCAACACGCAAGAATCAGACTCAACTTTGTGGAAAATTGAAAAGGTGTTTTATTTCAACTCGTCTTTCGAAAGCGTGGGGGATTTAATGGATGCTTACACCAATGGTTCTATTCCCAAAGTGTTCCTTCCGGCACCATCTTATTCGAGTGATTCTCCATTGTATTCATCCTTCCTCCGCCGGGGAGGACCACAACCCTCCATACCCTTAAGGCCACCTCGCATTGTTGAACCCGATGGAAAGCGTTACACTGTCAACGGTCGTCACGTGGAATACATGAAGTGGAGCTTTGATTTCCGGTCTCGAAGTTCTACCGGTCTGCAGGTGTTCGATATCAGATTCAACGGACAAAGAATCGTATACGAACTAAGCTTACAAGAGGCTGCCGCATTTTATTCCGGATGGAGCCCCATGCAGATGCAAACAGATTATTTGGATACTGCGTGGGGCATGGGAAGCAGCAAATTTGAACTAGTTCGAGGTACAGATTGCCCCGACACAGCAACTTTCTTTGATACAATCCATTTCGTAGACGCCATACATCCAGTCAAGTACAGGAATTCGATCTGTTTATTTGAGCTGGATCTAGGACTTCCTCTCCGGCGACATTTTGACAACAACTTTCAAGGTGGTTATAACTTCTACGGAGGCATGCCAGGGAGCGCATTGGTCTTGCGCTCAATATCAACGGCGTATAACTACGACTACATATATGATTACTTGTTCTATCCTAACGGCGTTGTGGAAGCAAGAGTGTCGACCACTGGCTATGTGCAGGCAACACTTTGGACACCCAACGAGGCTTCTTACGGAAATCCAATCCATCCATGGGTAGCGGGTACAATTCATGATCATTTACTCCATTACAAGGTGGACCTGGATATTTCGTGATGAAAACACTCTTACGAAACAATAGACATCAAGGTTGAAAATATCACAAATCCTTGGTTTCCTCAGGCAAGGCGAGTGCAGAAGGTGCTTAGGAGGAGCGTAAAGAAAACCGAGCAAGACGCTATTTACAAACAAAACTTTGAACATCCAAAGTATCTGAATTTCTTTAACAAAGGAATCGTGAACAAGATGGGCGTCAGTCGAGGCTACCGCATTCATATTCGGGACATGATGAAGCAGATGTACCCTAAAGACTGGGGCATAATTAATGGTGCTGCGTGGACAGAAAACCAAATGACCGTCACAAAATGGAAGGAAAATGAAGAAACAAGTTCTTCCATATACAATCAAAATGGCATGCATGACCCCGTAGTCGACTTTGCGAGATTTACAGAAGATAACGAAGGTATCGAGGACGAAGATCTGGTTGCCTGGGTAACAGTAGGTCTCATGCATGTGCCTCATTCCGAGGATATACCGAACACCGCAACCGCTGC

Protein

Uniprot

Uniprot term	Description
Q8JZQ5	Diamine oxidase [copper-containing] OS=Mus musculus OX=10090 GN=Aoc1 PE=2 SV=1
P36633	Diamine oxidase [copper-containing] OS=Rattus norvegicus OX=10116 GN=Aoc1 PE=2 SV=1
Q9TRC7	Diamine oxidase [copper-containing] OS=Sus scrofa OX=9823 GN=AOC1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02727	Cu_amine_oxidN2	Copper amine oxidase, N2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR015800	Domain	Copper amine oxidase, N2-terminal	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR016182	Homologous_superfamily	Copper amine oxidase, N-terminal	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0008131	Molecular Function	primary methylamine oxidase activity	Interproscan
GO:0009308	Biological Process	amine metabolic process	Interproscan
GO:0048038	Molecular Function	quinone binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan