Gene detail

Detailed information of aawi_s0114.g36.t1 in Acropora awi

Genomic Location: sc0000114_pilon:483536...493560
NR annotation: XP_044170464.1, uncharacterized protein LOC122954482 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0114.g36.t1

GATCAATATTTGAGAGAATTACACATTAAGCTGCTTGGACACTCTATACTGTGAAGCTGATTGGCTTTGCATGGTTTACAGAATTTCAGTGTCTGGCTAGGAAATCTACCCCTCCCCTCCCTTCCCCCTGTCTGATCCATAGAGAGTGATGTTCTACGACAGGAAGGCATCTGCTCTGTCATGATTTGTAATAAAAGAGCTGTCATGATATGTAACTAAACCTCTGCTGAGATTTATAATGAACCTTGATTTATGATAACAATCTACCTGTGTACTACATGAGTACTTTGGAAGCAGATTAATGCTGGTGTTCTGTTACATTGCCACATTGAGGTAGCTGGTGAAGTAATTTGCCCATTTGTGTAAAATATTTCTTTTCATTTCTTTTTGGATGGTCTACAGTTAACTCTTCATTGATCAAATTCAATTAATTTTGTTGACCCTCTGATTACTATAAAAAAGCAACACCTATGATTAATTTTTGTACGTCACACGATATTTACAAGAGTAAATAAAGTTGTTGTTATTGTTTTTTTTATAGGAGTGTCCTTTGAATGATGACCACAGAGTCAATTGTCTGCAAGCGATCATTCATGGTGTCTGACTTTCCAACCTCTTTATATAAAAAATAACTCACCCACAGTGTGTCACTCACACTTATCATCTCTTGTGAACGCCTAGGAGTGTCCTTTGAATGATGACCACAGAGTCAATTGTCGGCTGGCCATTATTCATGATGTCTGACTTTCCAAACCACAGATAAAACATAACTCACCCACAGTGTGTCACTCACGCTCATCATCCCTTGAGAATCTGTAGGTATATGCCCATATATTGCACAGTCATGCTTTGGCAGATGCACTCACTTCATGCATATATTACTGTTCAGCAATCAGATTTCACGGTGGTAGCAGTCCTTCCTTGTGTTGTTTGAAGATGGGTTGGTAATCAAGCTTGTTTGACCAGTTTTGATCACACTCAATAAGGATTAGAAGCAATGGTTCTATAAAAGCATCAACCCCACATTTTGTGGGCCAAAAGGTGTGAGTTTAGGTAGCATCATTTCCAAAGTAACAGTTCGTGTGCAGATCATAACTGATGCAAAACATTCACTGTCAGTGCCCACAGGAATCTTGTTTAGTTGTGAATGAAGAACTTCAGACCCATCCAATTAAAGTACATAAAAGTGACCAATACAGGAATGGAGGTGGGAACAAGAAGACCAAAGTAGCAGGGGATGCCTTCAACATTTTACTCCCAAAGCTAGCAAGATGCCTTGAGAGACTTTCGGCATTTGCAGAGAAGTACAAGTCAATTCCCACTCTTGGCTACACACATTTCCAGGATGCCTTCAACATTTTGCTCCCAAAGCTAGCAAGATGCCTTGGGAGACTTTCGGGGTTTGCAGAGAAGTACAAGTCAATTTCCACTCTTGGCTACACACATTTCCAGGGGAAACCACTGCGTGAAGATCTTGATTTAACTGCTCTTTTAAAAGCTGGAAGAGCCCTTGAGCTCAGTGAAACGCAAGCTAAAGAAGTGGAAAGCGACAAAACAACGGTGAACGTCATAAATGACAAGAAGGACAGCAAAAAGTGTTCAAAGAAAGGCAAAGGTTCCCGACAAGAGCGACACAGCGGGTCACGTAGCGGGTCACACAAGGAATCATGCAAGTCCAATGAAGCAACAAAATGCAGAAATTGTGGCGGCACCTATCCTCACAAGGACTCATGTCCTGCTAGAAGTAAGAAGTGCACCTCCTGTGGTAAGCTTAATCATTTTGCTAAAGTTTGTAGGACAGTTCCACCAGATTCAGTGAAACATATGACAGAAGAAGAAGGCACAGATGATGATGACTACGTCTACGCAGTAGGAGAGAAGAAACAACCCATGTGCAGATTGGAGGTCGACGGAGAATATCTAGAAACGATGCTGGATTCTGGAGCTTCAGTTAATCTCATAAATTCGAGAACAAGCCAAACGGCGAATTTTCTCCTATGGATCACCCACACCCCTACCCCTGCTAGGAACAATTCAGGCCAAGATAACTGCAAAATCAAACAGCACATCGGCGACCTTGCACGTTGTTAAAGGCAGTTCAGGAAACCTCCTAGAATATGCCACTGCACAAAGGCTAGGACTCCTAAAAATTGTTAA

Protein

Uniprot

Uniprot term	Description
A3KN12	Adenylosuccinate lyase OS=Bos taurus OX=9913 GN=ADSL PE=2 SV=1
P54822	Adenylosuccinate lyase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR008948	Homologous_superfamily	L-Aspartase-like	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43172	ADENYLOSUCCINATE LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004018	Molecular Function	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0044208	Biological Process	'de novo' AMP biosynthetic process	Interproscan
GO:0070626	Molecular Function	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan