Gene detail

Detailed information of aawi_s0119.g56.t1 in Acropora awi

Genomic Location: sc0000119_pilon:773059...776799
NR annotation: XP_015759266.1, PREDICTED: 26S protease regulatory subunit 10B [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q2KIW6	26S proteasome regulatory subunit 10B OS=Bos taurus OX=9913 GN=PSMC6 PE=2 SV=1
P62333	26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1
P62335	26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=PSMC6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF16450	Prot_ATP_ID_OB_C	Proteasomal ATPase OB C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050221	Family	26S Proteasome Regulatory ATPase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR032501	Domain	Proteasomal ATPase, second OB domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008540	Cellular Component	proteasome regulatory particle, base subcomplex	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0031597	Cellular Component	cytosolic proteasome complex	Interproscan
GO:0036402	Molecular Function	proteasome-activating activity	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0045899	Biological Process	positive regulation of RNA polymerase II transcription preinitiation complex assembly	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03064	PSMC6, RPT4; 26S proteasome regulatory subunit T4	-	Proteasome	ko03051	deepkoala