Gene detail

Detailed information of aawi_s0145.g15.t1 in Acropora awi

Genomic Location: sc0000145_pilon:482302...501258
NR annotation: XP_044166878.1, NACHT, LRR and PYD domains-containing protein 3-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0145.g15.t1

CATTATTTTAGCTCGTTTTCATTTAAGGTGATGGTAGGCTGCTGCTAATAGTGTTCGCAATAAAAGGAATGACTGCGCACACTGTGTCTTCAGTAAATGGAATGAAACCAAGTTTCAACACAGCTTTGCCGAGATGGAGGACTTGGTGAAGGCCATGGCATTGCCTTCTTCAAATGAAGAAAAAATTGTTGGAGAGCTCAAGGACTGGCAAAATAAAGGGACACAACTCTATATGAACTCCCTTGTGGACGAAGCACTATTGCAACTTATTCACCAAAATGTTCATTCGCTCGAAAATGAACGCAAGAATTGGTCTGAAGAACTAAAGGAAGTAAAGGAAAGAGTTCAACAGCAGCTACAGATATTTGACCTTGATTTTAGAGATATAAAGCAAAGGGTACTGAAACTAGAGACTGGTCACCAGAGACTAAAGTCTGGGCAGCAGAGATTGAAGACGGGTCACCAGAGATTGGAGACGGAGCAGCAGAGATTGAAGACTGGTCACCAGAGACTAGAGACTAGAATGACCCAATTTGAAGGGATTCCCGAAATATTTGTCCAGCTCATCAGAAGAGACTACAAAAGCTCCATGTTGTGTCCATTTCCATGGTGTGAAGATGAACTACAATTTAAGCTGGATAGCATTTTTACCAGGTTACATATTCTAAGCAAGACAAAGGAAAGATCAAGGCTGACAGATGTTCCTGTTAACATGACAGATATCTTCAAACCCCACGCGGAGTGCAAGAATCCAAGAGTAGTGCTAGTTGAGGGTAACCCAGCTATGGGCAAAACTACATTCTGTCAGAAGCTTGCCCATGATTGGTCCTTAAGTCGAATTCCATCGGATAGTTGGTTTCCCATGGTGGAAATACTGCTTTTGGTGAAATGTCGCGACATGGACGTGGGAATCGCAAACATCCGTGAAGCGATCGATGATCAGCTTCTACCAAAAGATGTTGAAAGAAGTGAAAAAGAAAACTTCTTCTCTTTCATACGCAATAATCAGTCCAGAATCTTACTGGTTCTTGATGGTCTAGATGAATTGAAGGACAAAGAGCTACTCCTTCCCCTGATTCGAGGCAAAGTGTTATCCAACATTTATCTTCTGTTAACAGCTCGACCTGAAATGGGAGCGAAACTGCGGCGATACTGTGACAGCGTACTTCAAATTGTTGGCTACACGAAGCGTGATGTTAACAGCTACATTGAGCGGTATTTCTTCAATCACAGTGACACGAGCCTTGCTGAGAAATTAAAGCGTCAGTTAGCTCACGATGATCAGCTCAAGGACTTAACTTCCAGTCCAATGAACACAGCTTTATTATGTCTTGTTTGTGAAGAAACAAATGGAATATTTCCCATCAAACAAACGGAACTGTACGAATGTCTTGTCTCGTGTGCTATCAGAAGATACTTTGCAAAGAGGGGAATTGACTTAGTTGCCGATAATCCTTCTGAGAGATACAGAGAACAGCTGAATCAATTAGGCAAGATGGCACTCGAGTCTTTGTTAGAGGATCGTCTTTATTTCAGCAAAGAGGAAATGAGGTCAGAAAATGTTCTGCAGTTGTGCTTTGTTACGCGTGAACCAAGTAgaagcaagatgaaaccaatcgaatgctatgcatttactcacaagacgtttcaagagtatttcgctgcgttgtatttggcgaatgagGTGTTAACCGACAGGAAGGAAAGCGAGGCGCTGCTGCTGAAAGTGAGTCCTGTGGACAATTGGCAAGTGTGGCAGTTTCTACTTCAATTGGTAGCAAAGAAGGACGGCGAACGGGCAGTGTTCCTTGTTTCATGTCTCGGTGCTGCTTTCTTACGTCTCTCGATACCTGAGGTAAATGAAATCACGGAAACCTGGCAGTTCGAAGATTCCATAGAGAGGCTTTTTAATCATTCATTTGGTTCTGAAACTTCTTTAGATGCAGTATTTCATGAAAGAGATAGATCATCCAGTGACATCGCCTTGGACAATGCACTTAATGTTATTGCTGACTGTGAAGATTTTGAAGAGAATATTTGAGCGGCAGCTTTACGTTGACAAAGCTACAGATATTTGACTCTTATAAAGACTATTCAAACTG

Protein

Uniprot

Uniprot term	Description
P33076	MHC class II transactivator OS=Homo sapiens OX=9606 GN=CIITA PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46844	SLR5058 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12800	NLRP3, PYPAF1; NACHT, LRR and PYD domains-containing protein 3	-	Pattern recognition receptors	ko04054	deepkoala