Gene detail

Detailed information of aawi_s0162.g20.t1 in Acropora awi

Genomic Location: sc0000162_pilon:694371...714594
NR annotation: XP_015780922.1, PREDICTED: uncharacterized protein LOC107358864 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

aawi_s0162.g20.t1

ATGATTGGTTACACACCCAAGGAATGTCTTGAATATCCACCTGATGACCTTGACATTGATGTTTTGATTATCCATTCCTACGAGTCTGACCTTGGAAGACAAGCGCAAACCATCCAGGGTACTAAAAACTGCACGTGGGTTCAAGTGGTTCACACAGTCAGTCAAGAGTTGGCCAAACACGAAAAAAATAAGATTCATGACCATAAACATGACCATGAGGTGCAATTAGAATTGTGTAAGCGTGCTGACATGATCATTGCGATTGGTCCCAAAGTAGCTGAAGCCTACCGCAATTATCTGGCATTCTCTCGCAAGTATGTTTTCGATTTAACTCCAGGAATTGCTCATGATTTGAAAGATGTTCGGCCAGTGGTTGAGTATGGGGAGATTTTCCGCATCATGGTCAGTGCAACCTACTATGAAAAGTACTTTGAAGCCAAAGGACTTGACATTGCTGCAAAAGCAATCAAATTGCTGCCGAGCACCTCTTACCGTATCTTGTTCCTTGTGAAGCCAAACGAAGACCCCGAAAAACTGGAAAGTCGTCTCGAGAGTCATCTCGATAAAAAACAATTCACTGTAGAGCGATTCGAAAAGAACACAGACAACTTCAAAACGTTGCTTTGTCGTGTACATCTAGCCATCTTGCCTTCACGGGAAGAGGGTTTTGGAACAAGTATACTGTCTGCATTGTCTGCTGCTGTGCCAGTCCTTATCAGTGGAAATACAGGGCTTGGAATGGCAGTGAAGGAATTAAGCAGTGGCCCAAAATATATTATATATTCTGACGAGCCACAAGTTTGGGCTAAGAAGATTAAAGAAGTTAGAAAAAGAGGTGCAAGAAAGTGCTCTATTGATGCTCAAAAACTGCGGAAAGAGTACATGGCAAAGTACAGCACGCAAGAGCAATGTCACGCACTGGTGAAGAAAATGCGGGAGTTGTATGCAGGTAAACAAGGTAATGGCATACTAATGAAAGCTTCAGTTGTAGATCACCCAAGGACAGTTAACGAAGACAAGACCCAGGCGATGATCCTTGGGAACTCATCCTACCGATACGACCTGGAATTTTCCGGCACTTCCATTGATATTAACAACCATTTAAAGATCCTAGAAATATGCTTAGATAACAATTTATCTTTGAAAGAACATAAAAGTATTCTGTTGAAGAAAGTATACTCCAAGATAGGCGCACTTCGCCGCCTTAAGCGTTTAGTACCGGCAAATACTATGTTGCTTCTTTACAAGAGTTTTGTGTTATCACATTTTGAATACTGCAGCTCCTTACTTATGGGTATAGCCGCTGGCCTCTCAAAAGCAAAAGATGAAGGCAAATTGAATGTAGCACTGGTGACAGATGATGAAGGCTGGAAAATTACAGTCACAGATCAGTTGCTCACTGAGCTGGCAAAGGATCCATCGGTGAAACTGTCTGGTCTAGTTGAAGAAACAAACCCTGAACTCGAAGCCTGGGCAAAGAAGTTGAACATCAAACTTTTCCTTCCAAAAAAGATGATTGGTTACACACCCAAGGAATGTCTTGAATATCCACCTGATGACCTTGACATTGATGTTTTGATTATCCATTCCTACGAGTCTGACCTTGGAAGACAAGCCCAAACCATCCAGGGTACTAAAAAGTGCACGTGGGTTCAAGTGGTTCACACAGTCAGTCAAGAGTTGGCAAAATACGGAGAAAAGAAGATTTATGACCATGACCATGATCATCAGGTGCAATTAGATTTGTGTAAACGTGCTGACATGATCATTGCGATTGGCCCCAAAGTGGCTAAAGCCTATGGCAGACATCTGAGATCCAGTCTCAAGGAAGTTTTCGATTTTACTCCAGGAATTAATGATGATTTGATAAATGCTCGGTCAGTGGTTGACGATGAGGAGGCATTCTGGATCAAGCTAGCCATCTTGCCTTCACGGGAAGAGGGTTTTGGAACAAGTATACTGCCTGCATTGTCTGCTGCTGTGCCAGTCCTTATCAGTGGAAATACAGGGCTTGGAATGGCACTGGATAAATTACCCAGTGGTGCAAAATATATTATAGATTCTGACGAGCCACAAGATTGGGCTGACAAGATTAAAGAAGTAAGAGAGACAGGTGTAGGAACGTGTACTGAGGACGCCAAACAACTTCGGAAAGAGTACATGGCAAAGTACAACACGCAAGAGCGATGTCGCGCACTGGTGAAGAAAATGTGGGAGTTGTTTCCAGATAAACAAGGTGACACACAAGGCAAAACAAAGGAGGAAGGATGTGATGTTCCGGATGCACGAAAAAAAAACAGATCTGGAAACAAGTTTTGCATGTTCTCTTAA

Transcript

aawi_s0162.g20.t1

NNNNNNNNNNNAGTTGAAGAAACAAACCCTGAACTCGAAGCCTGGGCAAAGAAGTTGAACATCAAACTTTTCCTTCCAAAAAAGATGATTGGTTACACACCCAAGGAATGTCTTGAATATCCACCTGATGACCTTGACATTGATGTTTTGATTATCCATTCCTACGAGTCTGACCTTGGAAGACAAGCGCAAACCATCCAGGGTACTAAAAACTGCACGTGGGTTCAAGTGGTTCACACAGTCAGTCAAGAGTTGGCCAAACACGAAAAAAATAAGATTCATGACCATAAACATGACCATGAGGTGCAATTAGAATTGTGTAAGCGTGCTGACATGATCATTGCGATTGGTCCCAAAGTAGCTGAAGCCTACCGCAATTATCTGGCATTCTCTCGCAAGTATGTTTTCGATTTAACTCCAGGAATTGCTCATGATTTGAAAGATGTTCGGCCAGTGGTTGAGTATGGGGAGATTTTCCGCATCATGGTCAGTGCAACCTACTATGAAAAGTACTTTGAAGCCAAAGGACTTGACATTGCTGCAAAAGCAATCAAATTGCTGCCGAGCACCTCTTACCGTATCTTGTTCCTTGTGAAGCCAAACGAAGACCCCGAAAAACTGGAAAGTCGTCTCGAGAGTCATCTCGATAAAAAACAATTCACTGTAGAGCGATTCGAAAAGAACACAGACAACTTCAAAACGTTGCTTTGTCGTGTACATCTAGCCATCTTGCCTTCACGGGAAGAGGGTTTTGGAACAAGTATACTGTCTGCATTGTCTGCTGCTGTGCCAGTCCTTATCAGTGGAAATACAGGGCTTGGAATGGCAGTGAAGGAATTAAGCAGTGGCCCAAAATATATTATATATTCTGACGAGCCACAAGTTTGGGCTAAGAAGATTAAAGAAGTTAGAAAAAGAGGTGCAAGAAAGTGCTCTATTGATGCTCAAAAACTGCGGAAAGAGTACATGGCAAAGTACAGCACGCAAGAGCAATGTCACGCACTGGTGAAGAAAATGCGGGAGTTGTATGCAGGTAAACAAGGTAATGGCATACTAATGAAAGCTTCAGTTGTAGATCACCCAAGGACAGTTAACGAAGACAAGACCCAGGCGATGATCCTTGGGAACTCATCCTACCGATACGACCTGGAATTTTCCGGCACTTCCATTGATATTAACAACCATTTAAAGATCCTAGAAATATGCTTAGATAACAATTTATCTTTGAAAGAACATAAAAGTATTCTGTTGAAGAAAGTATACTCCAAGATAGGCGCACTTCGCCGCCTTAAGCGTTTAGTACCGGCAAATACTATGTTGCTTCTTTACAAGAGTTTTGTGTTATCACATTTTGAATACTGCAGCTCCTTACTTATGGGTATAGCCGCTGGCCTCTCAAAAGCAAAAGATGAAGGCAAATTGAATGTAGCACTGGTGACAGATGATGAAGGCTGGAAAATTACAGTCACAGATCAGTTGCTCACTGAGCTGGCAAAGGATCCATCGGTGAAACTGTCTGGTCTAGTTGAAGAAACAAACCCTGAACTCGAAGCCTGGGCAAAGAAGTTGAACATCAAACTTTTCCTTCCAAAAAAGATGATTGGTTACACACCCAAGGAATGTCTTGAATATCCACCTGATGACCTTGACATTGATGTTTTGATTATCCATTCCTACGAGTCTGACCTTGGAAGACAAGCCCAAACCATCCAGGGTACTAAAAAGTGCACGTGGGTTCAAGTGGTTCACACAGTCAGTCAAGAGTTGGCAAAATACGGAGAAAAGAAGATTTATGACCATGACCATGATCATCAGGTGCAATTAGATTTGTGTAAACGTGCTGACATGATCATTGCGATTGGCCCCAAAGTGGCTAAAGCCTATGGCAGACATCTGAGATCCAGTCTCAAGGAAGTTTTCGATTTTACTCCAGGAATTAATGATGATTTGATAAATGCTCGGTCAGTGGTTGACGATGAGGAGGCATTCTGGATCAAGCTAGCCATCTTGCCTTCACGGGAAGAGGGTTTTGGAACAAGTATACTGCCTGCATTGTCTGCTGCTGTGCCAGTCCTTATCAGTGGAAATACAGGGCTTGGAATGGCACTGGATAAATTACCCAGTGGTGCAAAATATATTATAGATTCTGACGAGCCACAAGATTGGGCTGACAAGATTAAAGAAGTAAGAGAGACAGGTGTAGGAACGTGTACTGAGGACGCCAAACAACTTCGGAAAGAGTACATGGCAAAGTACAACACGCAAGAGCGATGTCGCGCACTGGTGAAGAAAATGTGGGAGTTGTTTCCAGATAAACAAGGTGACACACAAGGCAAAACAAAGGAGGAAGGATGTGATGTTCCGGATGCACGAAAAAAAAACAGATCTGGAAACAAGTTTTGCATGTTCTCTTAATGAAAGTCACTGACATACCCTCAGAAGTGTACTCTCAAGTCTGTGTAAAGCTGAGTTTACAAAGAGATCTCATTTTGATGACTTTAGAACGCTAGCACAGAAAGTTGGATTAAATTATTATGAAACAGCATTCATTGCGCAGGATTATCCAAATCATACTGATGAAATTCTTGAGACTTGCGCAGTGAAGAATGAAGCTACGGTTGAAAATTTGATTGAATCGTTGAAGGAGCACTGACTGACAGCTTTGACAGACAAGATGTAGTGCAGATACTCTAGGATAGGATTAATGAAAATCTAACTTACTGAATATGCAAAACGTTTAGAGCATGGATTTTGTCTCATTCAAGGTAATTTACATAAATGAAGCCAAAAAATTTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
PTHR46401	GLYCOSYLTRANSFERASE WBBK-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009103	Biological Process	lipopolysaccharide biosynthetic process	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan