Gene detail

Detailed information of aawi_s0170.g8.t1 in Acropora awi

Genomic Location: sc0000170_pilon:115816...117978
NR annotation: XP_015748108.1, PREDICTED: BTB/POZ domain-containing protein 6-like [Acropora digitifera]
Species abbreviation AAWI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

aawi_s0170.g8.t1

GAAGGCTTCTCAATCATCTGCAAAATGTTCACTGGCCAGCCTGATCAGTCTGTTGTCGATAAGACTTGCCCAGAACACTGGCAAACAACTAAAATTACCATCAAGGACAGGTGTTCTTTCCTGTTTAACAACGAGCTCTTGAGTGATATCAGGTTTACTGTTCCTGTCCCCGGCGAAAGCGAAAGTAAGAAATCCAAGCATGAGATTTTCGCCCACAAGTTTCTTCTGTCGATCAGCAGCCCTGTGTTTTACACCATGTTTTACGGAGCAATGCCAGAGACAAGAGAAAATGTTGAATTGCCCGACTGCGACTACAAGGTTTTTGTGGAGTTTCTGCGTTATATTTACTGCGACGAACTCATACTGAGTGAAAGCAATGTGTCAGAAGTGCTGTATATGTCGAAAAAATACATGATGCCCCCACTTGAAGACAAATGCTGGCAATTTTTGGTGAGTAACATGTATCCATCAAATGTTTACAGCGTTTTGTCAGTTGCTGAGTTCCACGAAGAGGAAAAGGTAGTGAATCTTTGCTGGAAAATGATTGACGGGCAAACACAAGCTGTGCTCAGACAGCCAATTGAAAGACCTCAGCTAGAAGCTATAGTTATAAGAGATACTCTAAAGATAGGAGAAGTGAAGCTTTTTACCGCTGTTGATAAGTGGGCAACGAGTGAATGTGAAAAAAATGGCTTAACGCCAGATGGGAAGACGAAAAGAACGGTTCTTGGAGAACAAATCGTCAAAGCAATTCGTTTTCCACTGATGGAACGACATGAATTTAACCGGGTTGTTACCCCTATTGGCATTCTTTCCAGCGAAGAAGTTAGTCTACTCAAAAAATACTTTCAGAAAACATTAGATGGTCCGATAGGATTTCCAGCGGATCGCAGACTACCAAATGACCTGGTTCGACATGAAAGGTTTCGCTATTGCGGAGGGACACATTTATACCACAACGGTTTAGAAGATGCTCTTGCTTTTGAGGTGATTTATCCTATTGAACTGTACGCAGTTTGTCTCTATGGTAACAAGAACAGCAATTATTCTGTAACGCTTGAGTTGATTGACGAAGAATCGGGAGAGGTGGTGTTGTCGGAAACGGGAAATTTTACCTCGGTACCTTTTCCTTTGGAGGGAGATGCCGAATACTATGGTTTTGAATTTTTATTTGATCGACCAGTTTATATCGATGTAAACACCAAATATTGCGTGGAGGCACTAATATCAGGACCAGGTTCTGTGAGTGGAACAAAGTGCTACCCAAACACGGATTGTTTCATTTTCTCAAAGTCTAAACATGACAGAAATGGAACGGATGAATATAGAGGACAATTTTCAGGATTTATTTTTCAAAGAAAAAGAGAAAGCTAGATATATTCAAAGGGCACAAACTTATTCTATCATTACACATATTTCCATTCTGTGTTGCGGAGATTTGTCTTTCTTTGGCCTTAATTTTTTAGGGACTTTTGGTCCAGAATGAGCCTCATTGAATCCATAGGAGAATTCAATGTGTTTGAAATGTGGGGTGACACTGAGCATGTGTGCCAATAAAGAACAAACCACACGAACAATTCCCAAATTATTAGTTTTGCCCCTGTGTATATCTTAAAAGATTATGAATGGCATTTTCATTGGGTAATTTTGAAAAACTTGAAAATATACATGCAAATAATGAAGTTTATTAAATTGCAACCTGGGATCTTGCATTTCTAGCCCTCAGAAGTACAAGAAATAACGGTATACAAGTTCAGTATTTAATGAAATGtagtaaaacaataattattattgtactgtaagagctggttggatatgagattggttaaaacccactctccactgtgcagcttgttagtatttaccatctcacatctaatgcacactcgtggaacaatAACCTTATTGTTGAATAACTGTCCTCTGGCAATTTCTCCAATTAGCAATTCTCATACATTGTCAATGGCAGCCATTTTTGGCTGAAGAGCAAAGTCATATTTGAGCAATTTGTGGACTGCTAGAAGCAAGTAAAGCTTTAATTTACTGCGGCAAATATCTGTCAATTGTAAGCTTTTGATATTTTTTATGTGCAATTTGGGGACAATCTTAACCACCTAATGGTTGCCATGGATGCCTCAAAATTAATAAACAACAAATAAAAAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P58544	BTB/POZ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Btbd1 PE=1 SV=3
Q9H0C5	BTB/POZ domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BTBD1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000093 (this species only)
Transcription factor family	ZBTB · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan
PF08005 all species →	PHR	PHR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038648 all species →	Homologous_superfamily	PHR domain superfamily	Interproscan
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR012983 all species →	Domain	PHR	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45774 all species →	BTB/POZ DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0022008 all species →	Biological Process	neurogenesis	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10478	BTBD3_6; BTB/POZ domain-containing protein 3/6	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.