Gene detail

Detailed information of aawi_s0185.g44.t1 in Acropora awi

Genomic Location: sc0000185_pilon:461341...468325
NR annotation: XP_029212559.1, cytosolic arginine sensor for mTORC1 subunit 1-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0185.g44.t1

TTTACTGTTTTGTTAGTTTTTTTTTTCACGCTTAATTGCGGTGCTCCAAGGAGAGACATACACATATTTTTTTTTAAAAAAGGAGTACCAACGGACAGTTCTCTTGGGTGCTTAGGATATCGCGCATGCTTGTGAACTGATCGAGTACCTTGCAACTGGCGAAAAATTTCAAAGAGAGATCTTGCGAGAACGATGCGGCTACTACGCAACCGTTCTGATCAAGCTTCCTGAAGGCATTTACCTACATGTTTGTCACATGGTTTTGGGGGGAAGTACTGCTGTTATCGAGCGGTAATATCAACAGAGATCCGTCACGTTTTTGAAAGGAAAGAACTCTCGGGATCGCTCAACTTGCAACGTGTTTCTTGTATTTGGATTAAACAATGAATGGATGTTTAAGTTATTCTTCTGAACTTCACATTCTCGAACATAAACTGAGAGTTTCTAACCTGAAGAAAGAAGCCATCTCACTTTACACTCACGCGCTTATAAAAATTTCATTGCTGCCTCGATCAAAGCCAAGATTTTTTAGCTTTACTGAAACTCGAGATGGCTACACAATAATTGTGGAGGATGATCTTTGTAAAGAACTTCCTCATACTGAGAGTATTGACATGCCTGATCTTGTGTGGCGAGTACTGTCTGTTTCTGCAGGTGCATATGGCAACAATCAACTGACTGGAATCAGTAGAATTGTCAAGACTGTAATCACTCCTTTAGCAGACTGCAAAGTGTCAGTACTGGTCATATCAACATACCAATCAGATTTTGTCTTGGTTAAAGAGGTTGATCTTGATACTGCAATTAAATGCTTGGCTCACAATTACAAAATATTTAAAGATAGTGGATCAGGATTGGAACCTGTGATCTTGTCCATTGGTGACAGAATGGATGGGATGACAAAAATGATTGAGAGGAAAGCAGATAAACACAGACCAATTGTTCACCCCTTTACATGCGCAAAGAACAGATTTCATGTTACAAGTTTGGATTGCAGGATATTACCAAGTTTAACCTCTATTTTAATTGATCTGATGTTTTACTCAAATTCACCCGATGACCAGGGATGTGAGTCGTTCTTTCACCTTTCCATTGTTGAAGGAGATATCTCATTAGTTTTGGATAGCGAAGCTTTGTCAAGATTTCCAAAAGGCTCACTTTACACCAACACTCATGATGAAGGATGGAAAATGATCCGTGTTGGGGATACTCCACTAGGGTTTGATGAATTTGGTGTTGCTGCACAGATCGCTGAGCCCTTAGCAGATGTACAAATGTCAACTTATTACATCAGTACTTACGGCCTCGGACATACACTGGTGCCTGAAAGTGAAGTTGAAAAGGCAACAGAACTGCTCAGTTCATTACAGGTCAGATAAAGTGGCTATCTGACAGATAAAGTGGCTATCTGACCATCTTACAATGAAGTATTTATTGCGTAGATTTTTATCAAAAGTGATGGTATAATTAATTTTTAAAAGACTTCCCATTGAGTAATACAGAAAGAGTTTTACTTAGTTATGTTTGGCAACAACACTTTTTTAAAAATGATTTTTCTATCCAGTTTGCTCGCAGCTTTGAAATTGTTGGGTGTGTTAATGTGGATTCATGATCAAAGTATATAATGTCACAAATGCTATGCATCAGAACCATTACAGGGTTAGCCCCAGTAACTGCATCAGAAGTCTGCAATTTTAAGCTTAAAGGGAAAGGGTTCCATTATTTATGTAATAATTTATTCTGTACTTCCCCCAAAAAAAACATCTCTGAATTTGTTCTTGAAATCTGAAACCAAAGATTGAGAAGATGGAAATACAGGTGGTGTTTTCTAAAATATGGGAAGCTCTTTCTACTTACATCAAATAATTTTAATGAGAAGAATGTTTAGTATGGAAGTTGTGTGTTTCATCTAATTTTGTGTGGAAAAAAAAAAAAGACAAAACTGTCATGAGAGAGAGGGAGAACTCAAGCTGGAGATGATTTTGGTTTCCCTATGGTGTAGAAAATAAAAATAAAAATGAAACAATCACCACCATCAGGAAAACTGTTGTTAACTATTGAAACAGTGCAATTTGAAAGAGTGGCTAGTTTAGTAACATTCGTCACTTGAACAATGGCGTACTGTTCTTGAGGTTTATTTATATAATTTTGGCAAGATCTAATTTATTAAACTTTTAAAATTTAT

Protein

Uniprot

Uniprot term	Description
Q0V8A3	Cytosolic arginine sensor for mTORC1 subunit 1 OS=Bos taurus OX=9913 GN=CASTOR1 PE=2 SV=1
Q8WTX7	Cytosolic arginine sensor for mTORC1 subunit 1 OS=Homo sapiens OX=9606 GN=CASTOR1 PE=1 SV=1
Q5R9D1	Cytosolic arginine sensor for mTORC1 subunit 1 OS=Pongo abelii OX=9601 GN=CASTOR1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13840	ACT_7	ACT domain	Domain	Interproscan
PF18700	Castor1_N	Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain	Domain	Interproscan
PF21389	CASTOR1_ACT-like	Cytosolic arginine sensor for mTORC1 subunit 1/2, ACT-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051719	Family	Cytosolic arginine sensor for mTORC1	Interproscan
IPR027795	Domain	CASTOR, ACT domain	Interproscan
IPR045865	Homologous_superfamily	ACT-like domain	Interproscan
IPR040778	Domain	CASTOR1, N-terminal	Interproscan
IPR049479	Domain	Cytosolic arginine sensor for mTORC1 subunit 1/2, ACT-like	Interproscan
IPR026249	Family	CASTOR family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31131	CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23081	CASTOR2; cytosolic arginine sensor for mTORC1 subunit 2	-	mTOR signaling pathway	ko04150	deepkoala