Gene detail

Detailed information of aawi_s0214.g13.t1 in Acropora awi

Genomic Location: sc0000214_pilon:233046...236232
NR annotation: XP_015769607.1, PREDICTED: Krueppel-like factor 6 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0214.g13.t1

ATTATTTTCCGTGTAATTTGAGCGTCGGCGAGCGCGCTTGACAGAAGCGCAGTGTTGTGTTATTGTGACATTCCTTCATTTCAGTCATCCGTGGCAGTCGATTTATCGACGCTCAATTTTCAATTCTCTCTTACACGCAAACAACATGGATCTCCATTCTGCTCTACCTTGTGCTTCTATATTTCACGAACTCCAAACCGTTCACGACACTGGCTTTTTCTACTCGCTTCCTTCGCTTGAAGACGATTGGGCCCAGACGAGGCTCGAAATGGATCGTTATCTTTGTCCAGAACCATCTTCTCTGGACAGCAAAGACTCAAATTTAACAAATCCTGCTCCTTGGAATGAATTTTTACTGCAACCTTTCGACGAGACAAATTTTCCATTTGGCGATGATTGGGATATCAAACCGATAGATTTCACTTCAATTGCCACTTTTCCTTCTGTGCCCACCGTGCTCCCAGAAACTCCAACTGAAACTAAACCCTCTATGGAGCTCCCAGTAAAGCCTCTGAAGATCACATTACCTACTCCAGCAAGCTGCGAAGAGATTAGCAAAATTCCTAAGCCAGTTTTACCACTAACACCACCGAGCTCGCCAGAATCACCAGTGCTACTATTCAACAATTCTCAACAACGAGCGGGTCGACCAGCTTCGCGCTCGCCACGCGTGAAAAGCACAAATGGAGGCAACACCAGGGCAAATAGCCCAAAAGACAAAGACTCCGAGAGTAAAAGGAGAGTTCATCGTTGTCAATTCAGTGGATGCCGAAAAGTTTATACGAAGAGCTCGCATTTGAAAGCTCATCAACGCACTCATACAGGTGAAAAACCGTACCGTTGCTCATGGGATGGATGCAACTGGCGTTTCGCTCGCTCAGATGAACTTACTCGACATTACAGAAAACATACAGGAGCGAAACCGTTCAAATGCGTTCATTGTGATCGTTGTTTTTCAAGGTCGGACCATCTTGCTCTACATATGAAAAGACACGCGTAGCAAGGAAAAAAGTATAATTGTAGGAAAATGAATATTACAATTTGGAATTCATCGGGCTACCTTTCATTCAGACAAGTTTGAATTGGTATCAATTATTCACGAAGCGAACCCCAGGTGACCAAAATGTACCGCAATCCCAGTACAACAAGGAACATGTGATTTCTCTGCAATTTCATTTTGCGAAGAGTTGGATAAGAACGGTGAGTACATGGCTCAACATGGACGAAAGCATTTTGGAGGTTTCATTTGCGAGCGAGTTTGCCTTATTTAGACGACAAGAAAGGCAGAATAATTTGCATAACAGCCGAGCGGAAATGAAAGCCTTGAAGAAGCGATTCAGTCCTTTGGGAATATATTAAGGGATTTTGTATTATTAAATTCCAAATAAAATCCTCGTATAAAGTGTTCTAAATAAGAAAAAAACATCAAACAATATGTACGTGCGCTTGAAATATCCAAATAGCCTGGAGGAGAAATCGATGTAAACATATTTTAGGTGAGATTTACCATACAGGCTCAAAACGAACTTTAAAAAAAAATTGTTATGTATATGTTTAATGTTGGCAGTTCTGTATGCATAAGACAGATAAAATATTAGTGTACAGAAATATTAAAATGAAAAAGAGAACTTCTTGATTTGATCAAGTGTATTCACACAGCCAAGACGGCGATTTTCAGTCCATTGTTACAACAGAGACCAGATGTTTTTTCTCTGTAAAAATTCGAATTCGACCATTGTTTATTGAAAGAAAATTGCTTATTTCAGACTGACAGAATAGATAAACCATTCAACATTTCTACTTCTTAGCTCTGTTTATTAATTTACATTTACTGACAATATTGGCCTTAGCAGTGTCTTGTTTTAATCCCGGAGAGAGCGAAAGCTTCATTATTACTAACTCTCTGTTTCCTGAAGTAGATCTCAACGCCATGCATTGACGATAAATTTAATTTAAAGCCAGTTCATTTTAATAATAGCAGAGCATTAATTGGTCCATGCTCAAGGCTTTTGCGCTCGTATGACATGAAAATGTTTACATCAGTTGTTTGTTTACATGATGTTTGCTTTCCTCGGCGTGAAGAATATGCCTTCGTGACATGATCCAGAGCATTGAACTTAAAAAATTCTTGCGGTACAGTCTAAACGGCTCGCTTTGTGAGCGTCTTAGTTCATTCATCTAATCGCTAAAACCACATCAGATAATTTGTCTTTCTTGACCCTAGAATTTGTTCTGAGTAGAAATATGAAATCACTGGATTGAAATCGGCAATGATATCGATCAAGGAAACGTGATCTACCAATTTTAGCGATAACATTCCTTTTAAAGATCACACAATCTTCGACGCTTCCTAATCCATTACTTTTCTTTGAATTGAACGAACAGTAACTAATTGAAAATTAGGAGCAGCTGGAAGGGGTTTGCATTAAACTTTAAGTTATGCTTTTAACGATTCGTATCAGTGATGTCAATTCTATTTTAGTCAACCAGACCTCAAGCATCTCTGAGTTTCAATATAAACGATTTAAATGCCTCTCGTTAAACTTCGTGTGGGCCGAAACCTTCTTATTTTCGTATTGGTGGTAACTCTTCTTTTGAAATAATGTCTGGAATATCAATAACTTTTAAAATTTCCTTCTACAAATATTTCATAAAACATGAAGTAATGTGGGCTTTGTTTAGGTTAAAAAATATTGAAATTTCGACTATGGAAAATATGCCAAGGGAAAACTCATGCTATTTGTTATTAGTTATATTTAAATCTGGCATGCCAAACTATCAAGAAACCATTTTCTTACCTGATAAGCAATTAGTGTAGTGAATATCAAATATTGGGAAAATACATGTCCAAGAAGGGTTAATTGTAGTGAGAAGCATTTTTACAGTCATTGTTGAAATGGGATATGTGTTTATTTTTTTTCTCCACAATAATTATTCTTTACTTTT

Protein

Uniprot

Gene family

Uniprot term	Description
O35819	Krueppel-like factor 6 OS=Rattus norvegicus OX=10116 GN=Klf6 PE=2 SV=2
Q99JB0	Krueppel-like factor 7 OS=Mus musculus OX=10090 GN=Klf7 PE=1 SV=1
Q99612	Krueppel-like factor 6 OS=Homo sapiens OX=9606 GN=KLF6 PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23235	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09207	KLF6_7; krueppel-like factor 6/7	-	Transcription factors	ko03000	deepkoala