Gene detail

Detailed information of aawi_s0217.g14.t1 in Acropora awi

Genomic Location: sc0000217_pilon:238597...263375
NR annotation: XP_044165711.1, uncharacterized protein LOC114975471 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aawi_s0217.g14.t1

ATGCAGCCAAAGTGGTTTGACCTTGTGGGTGCGAGGAACGAGTTGATGAAATGCCTCTCAGAGCTCGatcacgacaagataagctcagagctattgaaggccaattgtgactgggttaactttaagttaaacattccgactgctagccacatgggaggagcctgggaaaggcagatcaagtccgttcgcagcgtgctACAAGCTCTCCTGGCATCCAACGGCCAACAACTCGATGAAGAATCCCTGACCACTTTCATGTGTGAGGCGGAAGCCATCGTGAACAGCCGGCCGCTGACTGTTGACTCCCTAAATGATCCCGACTCCCTCGACCCATTGACTCCAAACCACTTGCTTACGCTGAAAACGAAGATCTTGCTTCCCCCACCAAGCAACTTCCAGGCTGAAGATCTTTACTCCAGGAGGCGTTGGAGACGCGTGCAGCATCTTTCCAATGAATTTTGGGCTCGATGGAAGAAGGAGTACCTTCTAGGACTGCAACAGAGAAACAAGTGGACTGATAGTCATAAGGACCTCCAGATAGGTTTCGATAAAGAGGATAAGGACCAACAAGCCAAGATTCTTCAAATGCTTAATCTTAAGGATGAGTATTTTCCTATTAAGAAACTGTGGATGGTAGATGCTGTAATCCCCAACCACAAACAAATCATGGGACTGGGACATGGAAGGGAGTTGAATGTCAAGGGTGGCATGAGCCAATCAGTAATGCGGGCACTTATTCAAGAGATAGCTGTCCAAGTCGGCAACAATTCAGATAAGGCTTCAcagaagaaaacatttcagcctatgagaattttagcgccagatgaattcagagatgttcctcacaacctggacccgttgctgagctctacaccagcagtgggttcaaagccaagttattctgtaccaaatgtttctccattgagaccgccaaagagaTGCAGGATTTGTCCCTTGTGTAGCAAGAGCGAAAGCTTAAATGTTGATGTTACTGGTACAAGCTCCGAATTGGGCTGCTCAATTATCAGCAGTGAGCTAGTCAGTCATCACAATGCAGTACCATCCCTAAACAGTGTTATAGGGAATCCTTACTCGTCATTCATTGGTGACCTAGACTATTCAGATAACAGTGAAAATGACAGTGCTGCTGATGATGACATTAGACGAGAAGAGATGTTTGAAGATCAAGTCCAATTTGGAGACAGACTGCATTCAATCATTGAAGATCTCTGTGATGACAGTATTGGGAGTGAAGATAGTGAAAGAGATGATGAGGCCACACTTACGATGGTGGAGGACCCTTACTTGTCAACTGAAATGGGTGACTCAGACCAATGTCAGGATATCAATGTTGAAACTTCATGTCCACAACTGTCAGCTACAGATGGACCAGCCAAGTCCTCCAATCAACCTGTTAGGGACGAGAGATACCAGTCCTCTGGTAACATGAGAGCCCCTACAGGACCACCACCCTCTGCGAGTGCTTCCCTTGATTCAACTAATCAATGTGTGGAGAATGTGCCTACCTCTTCAGGGCAATCAAAGGAACTAAAAGATGAAACAGTAGCAGGAAATCGCTCAGATGTGTTGGAGGCTCTTGAAAAAGCCTTTGCCAAGTTGACATCAACCAGTGACCTTCAGGATCTGATAGATCTCCACAGTAGAATGCGTGTTGTTGTGTCTGTTGAAAAACTCATGGAACATAAGGGGACATATTGTTCAGAAGTTGTTAGTGGTGTTAGGTGTGGTAAAGCCTACCAGTATTCTGCAAGGCATGTTGGAGCTCGAGTTGACCTAGAATGGAAATGTGCTAATGGGCACTGCGGAAAGTGGGAGTCATCTGAGGTGTTGACCACTAACAGATACTCAAAGGTGTATCTAAATGATTCATTGCTACCAATAGCCATAGTGTTGTCAGGCAATAATTTTGCAAAATTTGCACTTTTTTGCAAAGTGTTAAATCTTTCAAATGTCCATAAATCAAATTTTTGCAGTTTCCAGACAAAATGTGCATTGCCTGTGGTGAAAGATGTGTGGTTGAAGATGAAGGGCCTTGTGACTAAAATATTGAAAGGTTACAAAGAAATTTGTCTTTGCGGTGATGGTAGAAATGATTCACCTGGACACAGTGCACGCTATTGTGTTTATACTCTAATGGAGCATGTAACGAAAGCTGTTGTGGATTTGGAAGTGATTGATAAGAGGGAAACTGGGGGTAATTCAGCTGTAATGGAAAGAGAAGGGTTAAGAAGACTCTTGGAGCGCTTGATGACAGAACTGCCTTTGAATGAGTTATGCACAGATGCATCTTCCATGATAATCAAGCTTGTCAGGGATATGAAAGATAAATTTCCACTTCTAGCAGAAATGTTCCATTCCTTAGACATTTGGCACAAAGCAAAGAAGCTGACAAAAGCACTTCACCAGttcaggacaaatgcatcgaggagtggaaaattaagtgatgttatttcaagtttcaaggatgaacaagttctggctttgtgcggtgacgatactttccatgtgcaatttgtcgaagtctga

Transcript

aawi_s0217.g14.t1

CTACTTCTTGCATGGTTACCCTTGGCATCGAACTGGGTTCTATGAACCAATTGGCTCGTCTACCTCAGGAAAAATTGGATTCTCTCCTCAATCTTCTTCATCAGTGGTCTTCAAATCGATGGTGTTCCAAACGACAACTGCAATCTCTTATTGGCCACCTGCACCATGCAGCCAAAGTGGTTTGACCTTGTGGGTGCGAGGAACGAGTTGATGAAATGCCTCTCAGAGCTCGatcacgacaagataagctcagagctattgaaggccaattgtgactgggttaactttaagttaaacattccgactgctagccacatgggaggagcctgggaaaggcagatcaagtccgttcgcagcgtgctACAAGCTCTCCTGGCATCCAACGGCCAACAACTCGATGAAGAATCCCTGACCACTTTCATGTGTGAGGCGGAAGCCATCGTGAACAGCCGGCCGCTGACTGTTGACTCCCTAAATGATCCCGACTCCCTCGACCCATTGACTCCAAACCACTTGCTTACGCTGAAAACGAAGATCTTGCTTCCCCCACCAAGCAACTTCCAGGCTGAAGATCTTTACTCCAGGAGGCGTTGGAGACGCGTGCAGCATCTTTCCAATGAATTTTGGGCTCGATGGAAGAAGGAGTACCTTCTAGGACTGCAACAGAGAAACAAGTGGACTGATAGTCATAAGGACCTCCAGATAGGTTTCGATAAAGAGGATAAGGACCAACAAGCCAAGATTCTTCAAATGCTTAATCTTAAGGATGAGTATTTTCCTATTAAGAAACTGTGGATGGTAGATGCTGTAATCCCCAACCACAAACAAATCATGGGACTGGGACATGGAAGGGAGTTGAATGTCAAGGGTGGCATGAGCCAATCAGTAATGCGGGCACTTATTCAAGAGATAGCTGTCCAAGTCGGCAACAATTCAGATAAGGCTTCAcagaagaaaacatttcagcctatgagaattttagcgccagatgaattcagagatgttcctcacaacctggacccgttgctgagctctacaccagcagtgggttcaaagccaagttattctgtaccaaatgtttctccattgagaccgccaaagagaTGCAGGATTTGTCCCTTGTGTAGCAAGAGCGAAAGCTTAAATGTTGATGTTACTGGTACAAGCTCCGAATTGGGCTGCTCAATTATCAGCAGTGAGCTAGTCAGTCATCACAATGCAGTACCATCCCTAAACAGTGTTATAGGGAATCCTTACTCGTCATTCATTGGTGACCTAGACTATTCAGATAACAGTGAAAATGACAGTGCTGCTGATGATGACATTAGACGAGAAGAGATGTTTGAAGATCAAGTCCAATTTGGAGACAGACTGCATTCAATCATTGAAGATCTCTGTGATGACAGTATTGGGAGTGAAGATAGTGAAAGAGATGATGAGGCCACACTTACGATGGTGGAGGACCCTTACTTGTCAACTGAAATGGGTGACTCAGACCAATGTCAGGATATCAATGTTGAAACTTCATGTCCACAACTGTCAGCTACAGATGGACCAGCCAAGTCCTCCAATCAACCTGTTAGGGACGAGAGATACCAGTCCTCTGGTAACATGAGAGCCCCTACAGGACCACCACCCTCTGCGAGTGCTTCCCTTGATTCAACTAATCAATGTGTGGAGAATGTGCCTACCTCTTCAGGGCAATCAAAGGAACTAAAAGATGAAACAGTAGCAGGAAATCGCTCAGATGTGTTGGAGGCTCTTGAAAAAGCCTTTGCCAAGTTGACATCAACCAGTGACCTTCAGGATCTGATAGATCTCCACAGTAGAATGCGTGTTGTTGTGTCTGTTGAAAAACTCATGGAACATAAGGGGACATATTGTTCAGAAGTTGTTAGTGGTGTTAGGTGTGGTAAAGCCTACCAGTATTCTGCAAGGCATGTTGGAGCTCGAGTTGACCTAGAATGGAAATGTGCTAATGGGCACTGCGGAAAGTGGGAGTCATCTGAGGTGTTGACCACTAACAGATACTCAAAGGTGTATCTAAATGATTCATTGCTACCAATAGCCATAGTGTTGTCAGGCAATAATTTTGCAAAATTTGCACTTTTTTGCAAAGTGTTAAATCTTTCAAATGTCCATAAATCAAATTTTTGCAGTTTCCAGACAAAATGTGCATTGCCTGTGGTGAAAGATGTGTGGTTGAAGATGAAGGGCCTTGTGACTAAAATATTGAAAGGTTACAAAGAAATTTGTCTTTGCGGTGATGGTAGAAATGATTCACCTGGACACAGTGCACGCTATTGTGTTTATACTCTAATGGAGCATGTAACGAAAGCTGTTGTGGATTTGGAAGTGATTGATAAGAGGGAAACTGGGGGTAATTCAGCTGTAATGGAAAGAGAAGGGTTAAGAAGACTCTTGGAGCGCTTGATGACAGAACTGCCTTTGAATGAGTTATGCACAGATGCATCTTCCATGATAATCAAGCTTGTCAGGGATATGAAAGATAAATTTCCACTTCTAGCAGAAATGTTCCATTCCTTAGACATTTGGCACAAAGCAAAGAAGCTGACAAAAGCACTTCACCAGttcaggacaaatgcatcgaggagtggaaaattaagtgatgttatttcaagtttcaaggatgaacaagttctggctttgtgcggtgacgatactttccatgtgcaatttgtcgaagtctgacgtctgcggcagtttgtgtta

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31751	SI:CH211-108C17.2-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan