Gene detail

Detailed information of aawi_s0220.g33.t1 in Acropora awi

Genomic Location: sc0000220_pilon:373850...386675
NR annotation: XP_015778954.1, PREDICTED: uncharacterized protein LOC107356843 isoform X2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0220.g33.t1

GATAAAAATTATAAGAAGGGGTAGATTTGAGTAAAATCATGCATGTTATGTCAAGGAATAAAATTAGGGACATTCTGTATGTACAGTAAAATTGAAGTCATTCTgttgttctcattggtgaaatgttgtcactagatgaagtatctgaacaagcagatgcagtgagggaaatattaaacattagtctgctagcaagtgaatggaagtcatcagctggtggtttgtcaacattaaatagcgagcttgcaattcatctggcacagatgcaaagtgtgcgagtttcactgttggtcccagagggtgcttgtagtgatgaagacaaaagggaggctggaagttttcacatcagtattcttgatgcaaggaaatgtgttggtgttgatcctcttctttggttgagctacccacctcgaggtcacaaaatagatgttattgttggacatgatgtgaaacttggttgtcaggtgcaactcatcaaaagacatccaaactttgaaaattgcaaatgggtacatgtggtccatactgcaccagaagacattagcaaatataaggattatagtaatccaaattcaaaaggtgaagagaagcagtgggatgaggttgatctttgtaagagtgctgaccttattgttccagtgggaccaaagctggaaaaagcttatcatgggtatttgcagtcaagtaaagaaagtggggacttctttgagctcattcctggcctttttgagcgtgagtttggagatttggttgcaaagcagaagcccaaaaatgagagggatgattttattgtgttgttgtgtgggcgtggtgataaggaggattttgaagttaaagggtacaacattgctgtcaaagcctttgctgatcagcgactgaagggaaaacattactctctgctttttgtgggttcacctgaaggaaagcaggatgaggtcagggaaaggctgctcaataattgtggaattgataagaaacagctgacagtgagagagtttgtaaagagcagagaaaaaatgaaagatcttttctgtgaagtggacatggtcatcatgccttcaaaatcagaggGatttggTCTTGTTGCCCTTGAAGCCCTGTCAGCTGGCTTACCCATTCTTGTTGGGCATAACTCAGGATTTGCAAGAGCAATAGAGGACATTCCATTGGGATTATACAGCATAGTTGATTCAGAAGATCCTGCTACATGGGCTGCAGAGATTCAGGGTGTTCGTGATAGACATAGAGTGGTCCTTGAAGAAAAGAAAATTCTGAAAGAATATTACAGCAAGAAGTACAGTTGGAAAACACAACGCAAAGAACTCGTTGACAGATTATGGAAGATGGTTTATGGGATCTCTACTGCTCAACCTGTAGCAGCAGATGATTGGGAAGAAAAACAGCCAAGGGCAATCTCAGAATCATTTTATCCACCTGATCAAAGAACATTTCAACAGGGTATCGAGGATGAAAGGATGGATCCAAAAGTAGGCAAAATACAAAGATCAGAGCAAAAGTTACCTTCAGTTTCATCAGAGGCATTTGTTGTACCCCATTCAGTGCACAAAAGTAAAATTGCTGAAGAGGAGAGAGCCTTGGCAACACATGGAAACAAAAAGTACTTGGGAGAATTTGGAGgagaagcagacaggactttattttctcaacaagatgatcttgatcaggaaataagtatgattgggaaagccacagttggaagtgaagaagaggttattaagcaagaggacacagactggatgtttagaatgaaaaaggccagagcatctagaagcgctcttcacaaggcctcagtcaatggacaatatgaggaagtcaaaaggcatctttccagtggatgtgcggttgacgtaaaagatcagtttttgttgacaccattgcatcttgcttgttggtatggacaggaatctgttgtcaagctcttgttagagcatggtgcagatgtcaatgccacagataaggcgatttttgtggcgattccAaatcGCcTgtgtaaactagcggtgatttcatggtgatttcgtggcgacttgtcgccacaaaatcgccgcgGtttcgaacatgctcgaattttgaggcgatttactggcgaCtttttcagtttgagagtaacaaatcgccacgaaatcg

Protein

Uniprot

Uniprot term	Description
D5UJ42	D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) OX=446466 GN=mshA PE=3 SV=1
A1R8N8	D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1
A0JZ09	D-inositol 3-phosphate glycosyltransferase OS=Arthrobacter sp. (strain FB24) OX=290399 GN=mshA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46401	GLYCOSYLTRANSFERASE WBBK-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009103	Biological Process	lipopolysaccharide biosynthetic process	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan