Gene detail

Detailed information of aawi_s0242.g16.t2 in Acropora awi

Genomic Location: sc0000242_pilon:269786...301810
NR annotation: XP_044170391.1, uncharacterized protein LOC122954422 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aawi_s0242.g16.t2

atgacatctggtcctgcagccattgtttcgacaagagagaacaccaactattcccgtctgtgtcgtcttctggttgatgttggatctcaggtcctttgtgatactttcaatactatacactctccaaccaagttgtctgatgttttgtcaagtcctcctgtaaaattcgctttgcagtccctaagagataaaagagttttgaatgccactcagtggggaaagctgtacccaacccccacttcagctgtgtcatcgtccaactttgatattactctcctggtgatactgctgagaaatatttgtcatttgactccacctcgtagcactggaagctgggacaagctcccacctgtatctgataatggcactgaggacaacatagcaagaatcaagtattatcggaaccatgtttatggtcacacccccaaggcttcagttgatgacctaacattcaacatgctatggcaagagatcagcaatgccatcctttcccttgaagaaaaatatgagcctctgattgaccgtctgaagactgagagcatggatcctgacgaagagaagcactatcaaggattactgaaggaatggaaggaagatgataataatacaaaggaaaagcttgACGGAATAGAAGAAATGATGAAATCACTTCAGGATAGCATCAGTGAGATGCCAGAAAAGATGAGAGAAATGATGAAATCACATCAGGATAGCACCAATGAGAAGTTTGAAGAAGCAAAAGACTCCGAGATGGTAAAATCGGACGAGGACCTCCTCCTTGTTGAGTGTCCTACAATGGAAGTTGTACCTGTGGGACAAACGATAGGCAACGTTGTCCCTGATGCCATTTGTCAGTATCTCGCAAATCACATCAGCACCAAGTGGAAAAGGCTGGGCTTGCAGCTTTCGATTGATATCGATGTTCTCGACAGCATTGATCATGACAACCGCCTCGTTTGGGACAAGAGCATAAGGATGTTAAAGACGTGGAAGGATAAGTTTGATGACAAAGCAACAGTGGAGGTCTTGAGGAAAGCTCTGGAAAACATAGGAAGGAATGATCTCTCAAAAGAAGTGAGAGATAAAATGCTTGAAATGAAGGAGCAAACTTCTCCGCTGATTGAAGGACCAGCTCAACGGAATACTCTGACAGTTTCCGCAGATTCCTCGTGGCAGTCTGGATTTGACGCAAGCCTATCCCTCAATGGAACAACGCCAATTCAGACACTAAATGAACCAGAGTCGTCGCAGATGACCCAGTTTACTCGTCCCGAATCGGCTACTGCGAGTTCCTCTTATTCTCCATCATTAGTTGTACCTGTGGGACAAACGATAGGCAACGTTGTCCCTGATGCCATTTGTCAGTATCTCGCAAATCATATCAGCACCAAGTGGAAAAGGCTGGGCTTGCAGCTTTCGATTGATATCGATGTTCTCGACAGCATTGATCATGACAACCGCCTCGTTTGGGACAAGAGCATAAGGATGTTAAAGACGTGGAAGGATAAGTTTGATGACAAAGCAACAGTGGAGGTCTTGAGGAAAGCTCTGGAAAACATAGGAAGGAATGATCTCTCAAAAGGAGTGAGAGATAAAATGCTTGAAATGCCGGAGCAAACGCCTCCGCCAATTGAAGGACCTGCTCCAGGGAATACTGTGACAGGTTCCGTAGATTCCTCGTGGCAGGCTGGATATGACGCAAGCCCATCCCTCATGGGAACAACGCCAATTCAGACACTAAATGAACCAGAGTCGTCGCAGATGACCCAGTTTACGCGTCCTGAATCGGCTACTGCGAGTTCCTCTTATTCTCCATCAATAGTTGTACCTGTGGGACAAACTGTAGGCAACGTTGTCCCTGATGCCATTTGTCAGTATCTCGCAAATCATATCAGCACCAAGTGGAAAAGGCTGGGCTTGCAGCTTTCGATTGATATTGATGTTCTCGACAGCATTGATCATGAAAACCGCCTCGTTTGGGACAAGAGCATAAGGATGTTAAAGACGTGGAAGGATAACTTTGATGACAAAGCAACAGTGGAGATAAAATGCTTGAAATGCCGGAACAAACGTCTCCGCCGATTGAAGGACCTACTCCACGGAATACTGTGA

Transcript

aawi_s0242.g16.t2

GTATAATATGCTTGGCAGCTTGGCTGTGTACACTTAGCTAGGTTTCTGCATAATTTACACGTTCGGAGAAATTTGCTTTTTTCCACGAACCCTTTGTTAAAAAACACCTGGTTAAGGTCAAAGTATCTTGTCCCTCACAACGTTTCCCGAACCTGTCATGTTTGTCTTGCACCATGTCCTAAAAAAGAAAGGATGAAGTCAGATCAAGAGAGCCTCATCATTCAGCTTCAAAGGATGGAAGTCTCCTTGGAGAAACTTGTCCTTATTCGACAACAGCTAAACGGCTGGTACAGCCCCGAGTCTTATTATTTGGCGAAAACAGTGGCAGATGTCCCATTCCAGACTGCAGTCCACGTGGCTCCAGTAACTGGGATTGTTGTGCTTTTGTTCAGCGGTTTCGTCGTGTATTTTGGCGCAATCCTCAAGTACATGCAGTGGTTGTACGATACAGCTGGGAAGCCACAGTCGTCGCCAtaatgtttgagatatgacatctggtcctgcagccattgtttcgacaagagagaacaccaactattcccgtctgtgtcgtcttctggttgatgttggatctcaggtcctttgtgatactttcaatactatacactctccaaccaagttgtctgatgttttgtcaagtcctcctgtaaaattcgctttgcagtccctaagagataaaagagttttgaatgccactcagtggggaaagctgtacccaacccccacttcagctgtgtcatcgtccaactttgatattactctcctggtgatactgctgagaaatatttgtcatttgactccacctcgtagcactggaagctgggacaagctcccacctgtatctgataatggcactgaggacaacatagcaagaatcaagtattatcggaaccatgtttatggtcacacccccaaggcttcagttgatgacctaacattcaacatgctatggcaagagatcagcaatgccatcctttcccttgaagaaaaatatgagcctctgattgaccgtctgaagactgagagcatggatcctgacgaagagaagcactatcaaggattactgaaggaatggaaggaagatgataataatacaaaggaaaagcttgACGGAATAGAAGAAATGATGAAATCACTTCAGGATAGCATCAGTGAGATGCCAGAAAAGATGAGAGAAATGATGAAATCACATCAGGATAGCACCAATGAGAAGTTTGAAGAAGCAAAAGACTCCGAGATGGTAAAATCGGACGAGGACCTCCTCCTTGTTGAGTGTCCTACAATGGAAGTTGTACCTGTGGGACAAACGATAGGCAACGTTGTCCCTGATGCCATTTGTCAGTATCTCGCAAATCACATCAGCACCAAGTGGAAAAGGCTGGGCTTGCAGCTTTCGATTGATATCGATGTTCTCGACAGCATTGATCATGACAACCGCCTCGTTTGGGACAAGAGCATAAGGATGTTAAAGACGTGGAAGGATAAGTTTGATGACAAAGCAACAGTGGAGGTCTTGAGGAAAGCTCTGGAAAACATAGGAAGGAATGATCTCTCAAAAGAAGTGAGAGATAAAATGCTTGAAATGAAGGAGCAAACTTCTCCGCTGATTGAAGGACCAGCTCAACGGAATACTCTGACAGTTTCCGCAGATTCCTCGTGGCAGTCTGGATTTGACGCAAGCCTATCCCTCAATGGAACAACGCCAATTCAGACACTAAATGAACCAGAGTCGTCGCAGATGACCCAGTTTACTCGTCCCGAATCGGCTACTGCGAGTTCCTCTTATTCTCCATCATTAGTTGTACCTGTGGGACAAACGATAGGCAACGTTGTCCCTGATGCCATTTGTCAGTATCTCGCAAATCATATCAGCACCAAGTGGAAAAGGCTGGGCTTGCAGCTTTCGATTGATATCGATGTTCTCGACAGCATTGATCATGACAACCGCCTCGTTTGGGACAAGAGCATAAGGATGTTAAAGACGTGGAAGGATAAGTTTGATGACAAAGCAACAGTGGAGGTCTTGAGGAAAGCTCTGGAAAACATAGGAAGGAATGATCTCTCAAAAGGAGTGAGAGATAAAATGCTTGAAATGCCGGAGCAAACGCCTCCGCCAATTGAAGGACCTGCTCCAGGGAATACTGTGACAGGTTCCGTAGATTCCTCGTGGCAGGCTGGATATGACGCAAGCCCATCCCTCATGGGAACAACGCCAATTCAGACACTAAATGAACCAGAGTCGTCGCAGATGACCCAGTTTACGCGTCCTGAATCGGCTACTGCGAGTTCCTCTTATTCTCCATCAATAGTTGTACCTGTGGGACAAACTGTAGGCAACGTTGTCCCTGATGCCATTTGTCAGTATCTCGCAAATCATATCAGCACCAAGTGGAAAAGGCTGGGCTTGCAGCTTTCGATTGATATTGATGTTCTCGACAGCATTGATCATGAAAACCGCCTCGTTTGGGACAAGAGCATAAGGATGTTAAAGACGTGGAAGGATAACTTTGATGACAAAGCAACAGTGGAGATAAAATGCTTGAAATGCCGGAACAAACGTCTCCGCCGATTGAAGGACCTACTCCACGGAATACTGTGACAGGTTACACGCGTTCTTGGTTGCAGTCTGGTTTTGACGCCAGCCCATCCCTCATGGGGACAAGGCCAATTCAGACACCAAATCAGCCTGATTC

Protein

Uniprot

Uniprot term	Description
Q7TPV2	E3 ubiquitin-protein ligase DZIP3 OS=Mus musculus OX=10090 GN=Dzip3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR016729	Domain	FADD, death domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15077	FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan