Gene detail

Detailed information of aawi_s0265.g3.t1 in Acropora awi

Genomic Location: sc0000265_pilon:58116...66350
NR annotation: XP_029189134.2, GTP-binding protein ypt2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0265.g3.t1

ATCAATTTGCAAAGTCGCTCTGTCGTTGTCCTTGCACCAGAGTTATGGGAGAAAAAGACTACGAACTAACGTACAAAATTCTTATTCTTGGAGACAGCGGCGTCGGGAAAACTTGCCTGATCTTTAGATTTATAGAGGATATATTTTCAGACTCGTATATCTCGACAATCGGTATTGATTGTAGAAGCAGAAATGTGGACCTAGATGGCAAGAGAGTGAGGCTTCAAATTTGGGATACTGCTGGTCAAGAAAGATTCAGGACACTTACAAGTGCTTACTTTAGAGGGGCTATGGGTATAGTTTTAGTGTATGACATCACAACGGAGGACTCATTCAAAAATATAGCTCAATGGCTGCAAAATATTGAAGAGGCAAGTATTATAATAATTATAACATCAGCTATTATGAAATGGTTCTTTAAATACTAATAACTATAAGTCATCATGGTTTATACCCAAGAACCAGAGTCTACGTAGTGTTATGTAACTAATTGGGTGGGCTTCAAAATGAAAATTCATGAAATGACGTTATCAATGGAATTGAAATTAGGGCTTTTGAATGCTTCACCTAATGTTTGTAAAATTCTGGTTGGGAACAAGTTGGATTGTGAAGATGAAAGAGAAATCGACAAATTCAGGGGATTATCAATGAGTGAAAACGCTGAATTAGAATTTTTCGAAACCAGTGCCCGAACAGGAGAAGGTGTATCAGAAGCATTTATGGCAGTTGCACGGCAGATCAAAGAATTTCAAGACAGAAAGGGAGCGAGGTCGTTAGATGAAGATACTACGATTCCTGTCAATGCATCACATGGATCACCTCAAATGCAGTCCGCTTGTTGTCGCTGACAGATCATGGAGAACACCTAACATCTATTATATTGCATGCCAACCATGTTAAAAATCAGTATGTGGATCAATGGAAAAATATCATAAATACAGGGTATGTTTGATGAAAAAAGGTAAatccttagaggaaggacctgtcaagctcactgatgatgtaaaacaaagaaaacaagagactattgaaaattgtcaaacaccagcacaagctaaaaaaacaaNgGAGGGGACTCTGTCGAATTTACTGGCAATGAAGTTACAGTACCCAGAGGACACTTCACCGTGTTTTAAGTTCAACCCCGATGAAAATTTAATCAACGCTGCCAAAGAGTACAACAGGGGGCACTAAAAAGccaacagttagcttaaataaatctcagttaatttttttctcctcaattttatattcgcctgtggctagtggttccacagccacaatattatgatacaatttatcatcattgagaggacagacgcataaaagactgacgtcaatttgCAAACTCGAATTGTTGGGATGGAAATAGGGTCTTGTCacgcaacttgtagtataagctttgtaacgcataatgtataatggaacccaatggtcccgtcactcgttaattcgtgtttaaaatggcctattactgggtaattttctcaggatattcagacaatttaccaatctcagcaaaccgttactcaaagattttcagctatcagttaaaagacacatcgtttctcagctattagttgaaattttgcctgattctcagctatcagttaagtaaccatccataccctcAGTAAAGTGAACCCTTAAAAGTGAGAGTTACTGAACGAATGCAAAAGCACTAGAATTTTCATGTGATTATCATCTTATAGTATATCCTCAATCTTCTTTTTCTTGTGACCTTCTGGCGCTTCTAAATTCAATTTCATCAATGTTGTGTACGCAATCACGTACCCAGCACTGAGTACGCGGAGATTGGCGATGTCAGCAGCCCACGCGCGACATTTTAGTGTCCTTGTTTTATGACCATTGGAACTGCCACGTATCTCTCATTGGGCACTACTGTCCCTGACTAATCCCCAGGGAATCGTCTGTAAAAAGTGAAATTTCTGCACCCAGTGTAAATTTTTGATTTTTTAAGAAAGAGTGCGTGGGTAAGCTTCTTAATAATCAGACCAAGGCGCTTCAGATAAGTTAAGGTGATGAACGTATGTTTGGTTTCACGCCAAGTGTATCACTCTCCACCTCTggggcccgtttctcgaacgacccgaaactttccaggtgtcataaatccctttgtatcttcaataagaactcgtttcacgctttaaaacttggcagttattttgcctttcctcatatctgaaacatattaaaagaagaacagcttttcaaggcaagcggatcataatttcaagacttgcttttcgggcccgaaaagttaccgggtcttttgagaaacTACTGTCTGGAGCGGGAGAGGGGAAGGGAAGAAGAGAGATCCTAGCAACGAGGTTGTTTTAACTGACTCCCAGCTTAAATTAATACTTGAAAGACaaggttagtttgtgaagaaactgtggtgctgcgtctatgggcaaatgaaacactaaaatctttatctttattaaaaatgttCGTAAATCAGTTATTTATCACATTTTGGAACGAGCACTTTGCCCTCCATTTTCCTAGTTTTTAATGAGGATGCTACAGAATAGAGACTTTATGTGAAAGGTGTCGGTGAATATACTATGTCCTAGGTTTAAAATGTTAGCACACTGCATGCACGata

Protein

Uniprot

Uniprot term	Description
P17609	GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ypt2 PE=3 SV=1
P33723	GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ypt-1 PE=3 SV=1
P55258	Ras-related protein Rab-8A OS=Mus musculus OX=10090 GN=Rab8a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR050305	Family	Small GTPase superfamily, Rab	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47980	LD44762P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan