Detailed information of aawi_s0269.g13.t1 in Acropora awi

Genomic Location: sc0000269_pilon:301136...347669
NR annotation: XP_015770229.1, PREDICTED: sodium channel protein 1 brain-like isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q05973Sodium channel protein 1 brain OS=Heterololigo bleekeri OX=1423826 PE=2 SV=1
Q20JQ7Sodium channel protein type 4 subunit alpha B OS=Danio rerio OX=7955 GN=scn4ab PE=2 SV=1
P35499Sodium channel protein type 4 subunit alpha OS=Homo sapiens OX=9606 GN=SCN4A PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF16905GPHHVoltage-dependent L-type calcium channel, IQ-associatedFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005821DomainIon transport domainInterproscan
IPR001696FamilyVoltage gated sodium channel, alpha subunitInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR043203FamilyVoltage-gated cation channel calcium and sodiumInterproscan
IPR031649DomainVoltage-dependent L-type calcium channel, IQ-associated domainInterproscan
IPR044564DomainVoltage-gated sodium channel alpha subunit, inactivation gateInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0001518Cellular Componentvoltage-gated sodium channel complexInterproscan
GO:0005248Molecular Functionvoltage-gated sodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0019228Biological Processneuronal action potentialInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0086010Biological Processmembrane depolarization during action potentialInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04837SCN4A, NAV1.4; voltage-gated sodium channel type IV alpha-Ion channelsko04040deepkoala

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