Detailed information of aawi_s0327.g9.t1 in Acropora awi

Genomic Location: sc0000327_pilon:123026...149538
NR annotation: XP_015777793.1, PREDICTED: TNF receptor-associated factor 6-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B5DF45TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1
B6CJY4TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 GN=TRAF6 PE=2 SV=1
B6CJY5TNF receptor-associated factor 6 OS=Macaca mulatta OX=9544 GN=TRAF6 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan
PF12012DUF3504Domain of unknown function (DUF3504)FamilyInterproscan
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002083DomainMATH/TRAF domainInterproscan
IPR002104DomainIntegrase, catalytic domainInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR021893DomainDomain of unknown function DUF3504Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0031663Biological Processlipopolysaccharide-mediated signaling pathwayInterproscan
GO:0032813Molecular Functiontumor necrosis factor receptor superfamily bindingInterproscan
GO:0033209Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0045087Biological Processinnate immune responseInterproscan
GO:0051092Biological Processpositive regulation of NF-kappaB transcription factor activityInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070534Biological Processprotein K63-linked ubiquitinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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