Gene detail

Detailed information of aawi_s0328.g10.t1 in Acropora awi

Genomic Location: sc0000328_pilon:118847...123705
NR annotation: XP_015779638.1, PREDICTED: forkhead box protein J3-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0328.g10.t1

AGTCTCAAACTGAAGAGTCATGCGCATCCTTCAAGTCCCCTGCAGCGCTTTGGTTGGCAAGAACGCCATTGAAGCAATTATGGCGGATCTCAACAGCAGCCTGACAGCCATGGACTGGCTGCCGAAGCTAAGCGTTGGCTCTGCCTTGAACAGTACTAATACAAAAATATCGAACAACAATAATGAATCTAACAGAGACAAAAGTCCGTTTCGTAAGCCACCAAGCTCGCCTCTCGATCCGAACGCAACTTTGGACGACGAAGAGGCACAACAACACAAAACCCGCGAAAGTAAACCTCCGTACTCTTACGCCAACTTGATCACCTTCGCCATCAACAGTTCCCCTAAAAGAAAGATGACCTTAAGCGAGATCTATCAGTGGATTTGTGAGAAGTTCCCGTACTATAAGGAGGCTGGTACTGGTTGGAAGAACTCGATTAGACATAACCTATCACTGAATAAGTGTTTTATGAAAGTTCCTCGAAGTAAAGACGATCCTGGAAAGGGATCATACTGGGCGATCGATCAGAATCCGCAAGAAGATCCTGCACACTCTAGGCAAAACAGGAAGCGGCGAAGTAGTGATTCTAGGCTGTCTCCTTATGGACCAGAGGATGGGCGTATGTCTCCCATCAGTCCTCAGTCCTCGCCGTGTAGTTCACCAGCTTCACCCACATTAGCATCCCTCCAGTCTAGTGGTGGTTATTTTGGTTCATCACCAACAAGGCATAGCTATATGGGAATGTCGCCAACTGTTTCACCTAATCCATCACCCACAGTTGCAGGCAGTGGTGGATTTGGGTTGTCACAGAGCTATGGTGAACCCCCACGCAAGATTTTCCCTGAAGTGGCATTTGAAGATCTCAGTGCGTCGTTCAAAAATCTCTACAAATCAGTGTTTGATGCTTCACACGGAGGAGAGAATTTTGGTGGGGGAAGTATGAATGTAGGTATGTTTGCAAATAGCCAGAACTTAAACACCTcagcagcaattcaaaagcaacggcaacagcatcatcatcagcaattgcagcaacaacgtcaccaccagcagcaacaacaccagcaacagcaacaacgacaacaacaacaacaaaacaaTCTCATGCAAAACATGGAACTGCTCTTAGAAAGTATTAATACTGGAAGTCTTCAGAATTTTGACTTAAGTACATGGCAGATGTTTATGGACAGCATGAAAAGTGCTGATTTGCAGAATATAGGGGTTGACCAAAATCAGCTGCAAGATTTTGCATTTTCATTTAGTCAATACCTGCATCAACAAGGAATAATTCCTGATGCTAACCTTTCTATGCAGGGTGTAAGCCCCTCTTCATCTTCTGGTAGCAATATGATGGGGAGTTCAGCAGGAATGCTGCAAGTCAGCAATCCACAGTTTGCATCCCATGGCTCACCTTTGCAAGGTTCACAGCAAAGCTATAGTAGTTCGGCAAGTTACAGTGGCAGCTCAGTTCATTCCATACCGGGCATCAAGGTGACAACAATGGATCAACGCAGCATGGTGCAACCAATGAATCATGGGTCAATGGTTCAATCAAGATCAGTGGGTATtgatgatgatgatgatgaagaATTTGATTGGGAATCATTACTCTAAAGGAAGCATTTCCAAGAACTGCTGTCAGCTTGGGTACACAAAGAAAAAATATCCCATAGGATTTATGCTCAGGAATGGTAACCCTTCAAGTTGAGGTAGCAGTTTGAGATGTACAATGATTGCAGGCAATGGGGCAAGATAGGAAGTCTAGGACAGTGGTGGCAATAAGTTGTTAGAATGAGAATATTTGCTTTGAGGTAGCGTTTCATAAATACTTTGCCCCTGTACCAACTTAAAAGAGTATTGTTAATGCTAAAGAAGGGATTGTGATCTTTTGGCTTGAAAGCAGTGCTTTGAGGTGGAATAATGATAATAGACAAATGCCAAGGGAATGGATGTGATGTAAAATCTAAGGGCACTCACCTTTGGTCAGAACTGACTGGTAAGATCAATCAATTGGCTGATGGAACATGTCAGTTCTGCAAAACTGAAGACTGTTTCTTGTCAATCTCCCCCTGATATGGCAGGATGACCACTTTGGTGACAAGCAGCTGTCTAAAAATTTTTTTAGGCTGGCAGGTTATTGCTGGCCAGTTTTGAAGGAAATGGAAAGTTGTGAAAGAATCATTTTATCTTGCACCTAATTTGCCAAAAAGATATTCTAAGTCTTGAAAGAGTGTACGTTCATAATCCATGAGTGATATTTTTTTGTTTTTTAATCGTCTTGTCAAATTTTTAAATCCAAGATAGAAACAGCCCAAGATGGCGATAATGCGTGTGTAAGAGTATTATTTTTACCTAAATACTTATCATGAAACTGAGCTAAAATTTGACAAGCCAAGCTAAGCATGAAAACAGATTGCCACTATTTATTATTTCCTAACTGCTACAGGTTAGCATGCTAGAGTGGAGGAAAATCTGCACTTGCAAACAGTTTGTACAGTTTGTTATTCATGTAATATTTTAAAACATCTATTTGAAGCTAACTCCATACTAAATTCACTAGAATGAGAAAACTGTCAGTTAAACTCAGTGACAATAATAATAATATTATTAATGTGACATTTTAGGGCATTTTCTGTTTAACCAAAGTGTTAAACTTTCCTGTCCAAATTTAATGGAACATCAGACGTTCTCATTCTTATTTTTATATTTTTGCGGCAAAAATTGTTTATGCAATTGAACTGAAAATGCTATTACTTCTGGCACATTTTGAACAGAGACTTTTTTTTTCAAAGTTATAAGCAGCTTTAGTTTCAAGGAATGAAATTTGCAAGCTGAACTTGCAGTATTGAATTCATTTTGTGCAACTTAAGAATGAGATGCCTGTGGAACTTTACACATTTAATTGAAACTAACATTGTCTATCCCCTGCTATAAGTAGTACCAACAAGAAAAATTGGAGAAGTAAGGTGTTTTTATGGGGGCTCTAAAGTGTTGACTGCCAAGCTGTGGTTTACCAGTATGGAACTGTGTTCATAACCAATAGAGTGGTACAAATATTATTAAAACTTCAAATTGAAGATTAAACTTATGTTTTGATA

Protein

Uniprot

Gene family

Uniprot term	Description
Q9UPW0	Forkhead box protein J3 OS=Homo sapiens OX=9606 GN=FOXJ3 PE=1 SV=2
Q8BUR3	Forkhead box protein J3 OS=Mus musculus OX=10090 GN=Foxj3 PE=1 SV=1
Q28EM1	Forkhead box protein J2 OS=Xenopus tropicalis OX=8364 GN=foxj2 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Fork_head

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00250	Forkhead	Forkhead domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030456	Conserved_site	Fork head domain conserved site 2	Interproscan
IPR001766	Domain	Fork head domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR018122	Conserved_site	Fork head domain conserved site1	Interproscan
IPR045912	Family	Forkhead box protein J2/3-like	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46078	FORKHEAD BOX PROTEIN J2 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09403	FOXJ2_3; forkhead box protein J2/3	-	Transcription factors	ko03000	deepkoala