Detailed information of aawi_s0432.g4.t1 in Acropora awi

Genomic Location: sc0000432_pilon:69846...142687
NR annotation: XP_044164437.1, uncharacterized protein LOC114948698 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PFY8E3 ubiquitin-protein ligase TRIM45 OS=Mus musculus OX=10090 GN=Trim45 PE=1 SV=2
F7H9X2Tripartite motif-containing protein 2 OS=Callithrix jacchus OX=9483 GN=TRIM2 PE=3 SV=1
Q9C040Tripartite motif-containing protein 2 OS=Homo sapiens OX=9606 GN=TRIM2 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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