Gene detail

Detailed information of aawi_s1286.g1.t2 in Acropora awi

Genomic Location: sc0001286_pilon:1...14660
NR annotation: XP_015763298.1, PREDICTED: RNA-binding protein 5-B-like, partial [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P70501	RNA-binding protein 10 OS=Rattus norvegicus OX=10116 GN=Rbm10 PE=1 SV=1
P98175	RNA-binding protein 10 OS=Homo sapiens OX=9606 GN=RBM10 PE=1 SV=3
Q99KG3	RNA-binding protein 10 OS=Mus musculus OX=10090 GN=Rbm10 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17780	OCRE	OCRE domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR041591	Domain	OCRE domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13948	RNA-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18670	YAK1; dual specificity protein kinase YAK1	EC:2.7.12.1	Protein kinases	ko01001	deepkoala