Gene detail

Detailed information of aawi_s1680.g1.t1 in Acropora awi

Genomic Location: sc0001680_pilon:1...7547
NR annotation: XP_015747328.1, PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0JND4	Protein strawberry notch homolog 2 OS=Bos taurus OX=9913 GN=SBNO2 PE=2 SV=1
Q7TNB8	Protein strawberry notch homolog 2 OS=Mus musculus OX=10090 GN=Sbno2 PE=1 SV=1
Q9Y2G9	Protein strawberry notch homolog 2 OS=Homo sapiens OX=9606 GN=SBNO2 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13871	Helicase_C_4	C-terminal domain on Strawberry notch homologue	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR026741	Family	Protein strawberry notch	Interproscan
IPR026937	Domain	Strawberry notch, helicase C domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12706	STRAWBERRY NOTCH-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0031490	Molecular Function	chromatin DNA binding	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan