Gene detail

Detailed information of aawi_s2017.g2.t1 in Acropora awi

Genomic Location: sc0002017_pilon:1816...4644
NR annotation: XP_015768553.1, PREDICTED: DNA damage-binding protein 1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
A1A4K3	DNA damage-binding protein 1 OS=Bos taurus OX=9913 GN=DDB1 PE=1 SV=1
P33194	DNA damage-binding protein 1 OS=Chlorocebus aethiops OX=9534 GN=DDB1 PE=1 SV=1
Q16531	DNA damage-binding protein 1 OS=Homo sapiens OX=9606 GN=DDB1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DDB1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10433	MMS1_N	Mono-functional DNA-alkylating methyl methanesulfonate N-term	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050358	Family	RSE1/DDB1/CFT1/CPSF1	Interproscan
IPR018846	Domain	Cleavage/polyadenylation specificity factor, A subunit, N-terminal	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10644	DNA REPAIR/RNA PROCESSING CPSF FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0035861	Cellular Component	site of double-strand break	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan