Detailed information of acyt_s0001.g192.t1 in Acropora cytherea

Genomic Location: sc0000001_pilon:2554480...2578288
NR annotation: XP_029184843.2, LOW QUALITY PROTEIN: DNA repair endonuclease XPF-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q92889DNA repair endonuclease XPF OS=Homo sapiens OX=9606 GN=ERCC4 PE=1 SV=3
Q9QZD4DNA repair endonuclease XPF OS=Mus musculus OX=10090 GN=Ercc4 PE=1 SV=3
Q9QYM7DNA repair endonuclease XPF OS=Cricetulus griseus OX=10029 GN=ERCC4 PE=2 SV=3
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF02732ERCC4ERCC4 domainDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR006166DomainERCC4 domainInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR047520DomainDNA repair endonuclease XPF, nuclease domainInterproscan
IPR006167FamilyDNA repair protein XPFInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10150DNA REPAIR ENDONUCLEASE XPFInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0000014Molecular Functionsingle-stranded DNA endodeoxyribonuclease activityInterproscan
GO:0000110Cellular Componentnucleotide-excision repair factor 1 complexInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006296Biological Processobsolete nucleotide-excision repair, DNA incision, 5'-to lesionInterproscan
GO:1901255Biological Processnucleotide-excision repair involved in interstrand cross-link repairInterproscan
GO:0004520Molecular FunctionDNA endonuclease activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

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