Gene detail

Detailed information of acyt_s0004.g154.t1 in Acropora cytherea

Genomic Location: sc0000004_pilon:1759648...1769734
NR annotation: XP_044163654.1, adipocyte plasma membrane-associated protein-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0004.g154.t1

CTCATATGCAGAACCATGGTGTCATGCAGACAGGTTCAGCCTCCAAAAGATGTATAAGAATATGATTTATTTGGCAAAAAAGAAAACATGCACAAGTAAAATATTTCACAGGATCAGACATGCTGAAAGAAATTATCCATGAAATGGAAGGATTGCCTTACTTTCTTCGTGTCTGTCGAACGTGGAACTTTCTCTGTTACCTCCTCTTGAACATGGGTGTAACGTCGTTGTTGTTGTCTTTGCTGTTTCTCCTTTTGAGTGGTCTTGATTTTCTTCTATTTTTTCTGCCATCACCAATTGATCCCAAGCCTTTTAGTTTCCAGCAAATTCCACAGTTAGAGGGAGCTCTAGAAATTAACAACAACTTGACGAAAACAAAGAGGCTGTTTGAAGGACAGCTGGTGGGTCCTGAATCTTTTGCAATTGACAGCACAGGCATTCTATACACAGGTTTAGCGGATGGAAAAATCGTTAAACTTGAAGGAGACAAAGTAATAGATGTCATACAAACTGGCAAGCCACCTTGTGGTACTCCAGACCTTGAGCCAACCTGTGGCCGTCCATTGGGGATGCGTTTTGACAGATATGGAATCAATCTCATTGTTGCAGATGCTTATTTTGGTTTACTTGAAGTGAACACTCGCGCTAGAACAGTTAACACACTTGTGCCTCCGTCACCTGGCATAAATGGCAAGCCCTTTCGATTTGTTAATGACCTTGATATAGCTCGTGACGGAACCATTTATTTCACTGATTCAAGTGCTAAATGGCAACGTCGACAAGTGGCTGAAATGGTATTAGAACAAGAAGGAAGTGGAAGATTATTGGCATATCATCCCAAAACAGGAGACCTGGAAGTTTTATTGGAAGGCCTTTATTTTGCTAATGGAGTTCAACTGTCACCTGAGGGAGACCATCTACTTGTGGCAGAAACCACATCAGCGAGGATAATTAAGTATTACATTAAAGGAGAACATGAAGGCAAATCTGAGGTGTTTGCTCAGAATTTGCCAGGACTTCCAGATAACATACGTTTGAGCAGCCGTGGTGGCTACTGGGTTGGATTGGCAATGAAACGAACACCAGTGACTGATCTGTTAGGAAAGTACCCCAGAGCAAGAAACTTTTTAGTTAAGGTGGTTTCTTTGCCGCGGTTAACAAGTCTTTTTGCTGGACAAAAACACAACCTTATTCTGGAACTGAATGAGAATGGCCAGGTTGTAAGAAGCTTGCATGATCCAAATGGTAGTACAATTTCTGATGTCAGTGAGATACATGATGAAGGAGATGCACTATGGTTCGGTTCATACAAGTCCAACTTTATTGGAAAACTGGATCTTAAAGACTGATGTTTATTTTATTATTGATAAATAATCATACCCCAGTTGTTCACTGAAACTAGCTTGTACTATGGTTGTACTAAACAAGTTGGAAATACATGCAGTGGAATTAACACAGTAAACCTTTTATCCGTTGTTGGCTTTGCAGTTGTTGTGGGTATGGTTTATACAATAATACAGTGAGTTTGAGAAAATTGATAAGAAAGTCAGTTGGTGGCAGTAATCTTTGTTATAACTTCCAGGGATCTATACTTTTTTTTGGAAGCAAAAGGTGAAAATTAATATTAGAGGCTACTTATATTCCTAAACAAGAGTTTACTTTCATTTTGACTAGTTATTTATTTTCTGAGATGAAAACTATAAGATAGAATGATGCATACTGAAGACGTTCTACCATCAACATTTTCAAATGACACAAAATAGACTTGAGAGGGATATTGAGAGATGAGGGGAGCATACCCAGAAACAACTGGCTCAAGTACACCTCTTCTCTGCATAGTATTACAGATACAGTCGAACCTCTCCACAACAGCCACCTTGGGGACAATAGAAAGTGGTTGTTGTGGAGAGGCAGGAATGTCATATGACACCTGTTTTTCTTTTGGTGCTTTTCTGTCCATACTTATAGCAATCAAATGTAACTTAATGTTTAAAGGGAAAATGTCAAGAAAACAAAATGACTGAGGTACACATTGTTTGCTGCAGGCATTGAAGCATATTAATATTCCCCTTTTATGTACAAATGAAGAAAATTGGTTGTCCAAC

Protein

Uniprot

Uniprot term	Description
Q5ZIF1	Adipocyte plasma membrane-associated protein OS=Gallus gallus OX=9031 GN=APMAP PE=2 SV=1
Q7TP48	Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2
Q9D7N9	Adipocyte plasma membrane-associated protein OS=Mus musculus OX=10090 GN=Apmap PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03088	Str_synth	Strictosidine synthase	Repeat	Interproscan
PF20067	SSL_N	Strictosidine synthase-like, N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018119	Domain	Strictosidine synthase, conserved region	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10426	STRICTOSIDINE SYNTHASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0016844	Molecular Function	strictosidine synthase activity	Interproscan
GO:0012505	Cellular Component	endomembrane system	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan