Detailed information of acyt_s0006.g229.t1 in Acropora cytherea

Genomic Location: sc0000006_pilon:3291030...3345898
NR annotation: XP_044165089.1, nascent polypeptide-associated complex subunit alpha, muscle-specific form-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P39059Collagen alpha-1(XV) chain OS=Homo sapiens OX=9606 GN=COL15A1 PE=1 SV=2
O35206Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15a1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06482EndostatinCollagenase NC10 and EndostatinDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR010515DomainCollagenase NC10/endostatinInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR050938FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456SI:CH211-266K2.1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19721COL5AS; collagen type V/XI/XXIV/XXVII, alpha-Glycosaminoglycan binding proteinsko00536deepkoala

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