Gene detail

Detailed information of acyt_s0008.g164.t1 in Acropora cytherea

Genomic Location: sc0000008_pilon:2324828...2329647
NR annotation: XP_044171535.1, LOW QUALITY PROTEIN: uncharacterized protein LOC122955863 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

acyt_s0008.g164.t1

ATGTCAAGAGTCATCGGAGAAGAAAGGAAGGTACAGCCACCACGTGATCAGAGATCTGGCTGGTCTAACAGAAACAAACCCTTCGACGCCAGGGCCCTAACGACCGGTTCTGAGGAAGTAAGGGTTGAAAGAAAGAGCGACAAGAGACCACCTGAGCGTTGCCGCTTATGCAAATCTGCTCACAGCCTAGATGATTGCGGGAAGTTTGCGAAGATGTCGTACGCCGAAAAGTTGGAAGTTGTCAAGAGCAATGGGCTTTGTCTAGGGTGCCTGCGTTACGGACACATGAAAAGAGATTGTCGTGGGAAGAAGGTTTGTGCCACCTGTAAGGGCTTTCATCCAACGTCCCTGCATCACACGACACCGAGAGCACCACAGCAGACTGAGAGACCAGAAAGGCCCTTAGGGAGCACTGAAGAAGTGATGATTACTTCCCATCGTGTGAGCACCCAAGATACCCAAAACAGAAATGCCTGTGACTCACACTCCTTAATCGTACCCGTCTGGGTGCACCACGAGGCTAAGCCTGAAAGGAAGGAATTAGTGTATGCTCTTCTGGACAACCAATCAGATGCATGCTTTATAAGGGATGACATTCTTCAGAAATTGAATATTTCCGGTCCGGATGTCCAGCTGAAGCTGTCCACTGTGTTGGGGGAGGATCTGGTGACCAGTAAGAAGATTAACGACCTCGTTGTGCGCGGTATCAATGAAGAAATAGAAGTGTCGCTGccaaggacgtactctcgagacgagattccagctaaacgaagccaaatccccagacctgaatctgtgagtgggtggtcccatttacaacgcattgctaactatctgatgccatatcaacacgatgtggatgtgggtctccttataggagcgaactgcacgaaagcaattaagccaagagaagtgattcccggcgccgatgatgacccctacgcagttcgaacaactcttggctggggagtTATCGGGATAATGAATTGCACAACTGCCAACAGCCAGGGAAATCACTGTTTTTGCAACCGCATTGTATCACGAGAAATTGATTGCAACCAAACCAAGCTCAAAACCATCAGTCATCTAGTGGCAAGGACACAAGCAAAGGAAGTATTCGCACCTGCGCAACTGAGCAAGATGTTGGAGCGTGACTTTAGTGAAACATCAAGAGAAGATCACGCACTGTCATTCCTTGATAAGAAGTTCCTGAATGTCTTGGAGTCAAACATCCAGCACCGAGATgacggccactacgaaatgccattacctttgaaagaagaaggcttaaagttaccaaacaaccgcaccctagcgttaagtcgcctagaaaggctcaaacaaaggctaaagagagatagaagCCACAAAATGAAACTCAGCCTCAAGAAAGACTCAACCAAATCTGTTAAAGAAGAAGACTCGCTGCGCCCAAGCAAAGAAAGAAAACGTCAAGATGAGTCTTTAAAGTCCGTCACGCTAAGGGTAAAGGATCTCCAAACAGCCGAGTTGTTCCTGATCAAGGCTTCACAGTCCAAAGCGTTCCCAGAGGAAATGGAAGCCTTAGCGACCAAGTCACACCAAGAGGATGGGATATTAGGAAGctcagtcatcctcgcgccgcccggaaattttcaaggagccgatgtttactccaagaaacgttggcgtcgagtgcagcaactagcagacgaattctggcagcgttggagaaagagctacctacagtcCCTCCAGACCCGACAGAAGTGGACCACGCCTACGAAGAACGTTGAGGTTGGAGACATCGTCATCCTGAAGGAGGACAGTGTGCCTAGAAACTGCTGGAAACTTGCCCGCGTTGAGACCACTTACCCGGATGCAGATGGTTATGTACGGAGAGTAAAGGTAGCAGTTGCAGATCAGTCGCGTGATGTGAAAGGGAAGAGACCAGGAGCTAATGTGTCCTACCTGGAAAGACCAATTCACGGATTGATATTACTGATGTCACACAAGGAACAGAAGACCGGGGAGTCCCAGCCGAGGAGCCTTGAAAGAAGTTAA

Transcript

acyt_s0008.g164.t1

CTAAAGCGTGAAGCAAGGATAGCTTGTAATCCAGTGGCAATGTCAAGAGTCATCGGAGAAGAAAGGAAGGTACAGCCACCACGTGATCAGAGATCTGGCTGGTCTAACAGAAACAAACCCTTCGACGCCAGGGCCCTAACGACCGGTTCTGAGGAAGTAAGGGTTGAAAGAAAGAGCGACAAGAGACCACCTGAGCGTTGCCGCTTATGCAAATCTGCTCACAGCCTAGATGATTGCGGGAAGTTTGCGAAGATGTCGTACGCCGAAAAGTTGGAAGTTGTCAAGAGCAATGGGCTTTGTCTAGGGTGCCTGCGTTACGGACACATGAAAAGAGATTGTCGTGGGAAGAAGGTTTGTGCCACCTGTAAGGGCTTTCATCCAACGTCCCTGCATCACACGACACCGAGAGCACCACAGCAGACTGAGAGACCAGAAAGGCCCTTAGGGAGCACTGAAGAAGTGATGATTACTTCCCATCGTGTGAGCACCCAAGATACCCAAAACAGAAATGCCTGTGACTCACACTCCTTAATCGTACCCGTCTGGGTGCACCACGAGGCTAAGCCTGAAAGGAAGGAATTAGTGTATGCTCTTCTGGACAACCAATCAGATGCATGCTTTATAAGGGATGACATTCTTCAGAAATTGAATATTTCCGGTCCGGATGTCCAGCTGAAGCTGTCCACTGTGTTGGGGGAGGATCTGGTGACCAGTAAGAAGATTAACGACCTCGTTGTGCGCGGTATCAATGAAGAAATAGAAGTGTCGCTGccaaggacgtactctcgagacgagattccagctaaacgaagccaaatccccagacctgaatctgtgagtgggtggtcccatttacaacgcattgctaactatctgatgccatatcaacacgatgtggatgtgggtctccttataggagcgaactgcacgaaagcaattaagccaagagaagtgattcccggcgccgatgatgacccctacgcagttcgaacaactcttggctggggagtTATCGGGATAATGAATTGCACAACTGCCAACAGCCAGGGAAATCACTGTTTTTGCAACCGCATTGTATCACGAGAAATTGATTGCAACCAAACCAAGCTCAAAACCATCAGTCATCTAGTGGCAAGGACACAAGCAAAGGAAGTATTCGCACCTGCGCAACTGAGCAAGATGTTGGAGCGTGACTTTAGTGAAACATCAAGAGAAGATCACGCACTGTCATTCCTTGATAAGAAGTTCCTGAATGTCTTGGAGTCAAACATCCAGCACCGAGATgacggccactacgaaatgccattacctttgaaagaagaaggcttaaagttaccaaacaaccgcaccctagcgttaagtcgcctagaaaggctcaaacaaaggctaaagagagatagaagCCACAAAATGAAACTCAGCCTCAAGAAAGACTCAACCAAATCTGTTAAAGAAGAAGACTCGCTGCGCCCAAGCAAAGAAAGAAAACGTCAAGATGAGTCTTTAAAGTCCGTCACGCTAAGGGTAAAGGATCTCCAAACAGCCGAGTTGTTCCTGATCAAGGCTTCACAGTCCAAAGCGTTCCCAGAGGAAATGGAAGCCTTAGCGACCAAGTCACACCAAGAGGATGGGATATTAGGAAGctcagtcatcctcgcgccgcccggaaattttcaaggagccgatgtttactccaagaaacgttggcgtcgagtgcagcaactagcagacgaattctggcagcgttggagaaagagctacctacagtcCCTCCAGACCCGACAGAAGTGGACCACGCCTACGAAGAACGTTGAGGTTGGAGACATCGTCATCCTGAAGGAGGACAGTGTGCCTAGAAACTGCTGGAAACTTGCCCGCGTTGAGACCACTTACCCGGATGCAGATGGTTATGTACGGAGAGTAAAGGTAGCAGTTGCAGATCAGTCGCGTGATGTGAAAGGGAAGAGACCAGGAGCTAATGTGTCCTACCTGGAAAGACCAATTCACGGATTGATATTACTGATGTCACACAAGGAACAGAAGACCGGGGAGTCCCAGCCGAGGAGCCTTGAAAGAAGTTAAGAGTTACAGACAAGTATTGCGTGTTAAAAAAGGAAAAAAAAAAACAATGATTGACTTTGATTCCAGAACATTTTTTAGTGATTTGAACCCTGGTTTCTCTGTTTAAGTAAATTGTGTACAATTTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-