Detailed information of acyt_s0009.g29.t1 in Acropora cytherea

Genomic Location: sc0000009_pilon:527978...544214
NR annotation: XP_029192656.2, WD repeat-containing protein 48-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8TAF3WD repeat-containing protein 48 OS=Homo sapiens OX=9606 GN=WDR48 PE=1 SV=1
Q5RAW8WD repeat-containing protein 48 OS=Pongo abelii OX=9601 GN=WDR48 PE=2 SV=1
Q32PG3WD repeat-containing protein 48 OS=Bos taurus OX=9913 GN=WDR48 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyULD|UFD|RAWUL
Ubiquitin FamilyULD|UBL|SUMO

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF11816DUF3337Domain of unknown function (DUF3337)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR051246FamilyWD repeat-containing protein 48Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR021772FamilyWDR48/Bun107Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19862WD REPEAT-CONTAINING PROTEIN 48Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15361WDR48, UAF1; WD repeat-containing protein 48-DNA repair and recombination proteinsko03400deepkoala

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