Detailed information of acyt_s0012.g62.t1 in Acropora cytherea

Genomic Location: sc0000012_pilon:1136066...1140551
NR annotation: XP_029202870.2, retinal homeobox protein Rx1-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9I9D5Retinal homeobox protein Rx1 OS=Psalidodon fasciatus OX=223369 GN=rx1 PE=2 SV=1
O42356Retinal homeobox protein Rx1 OS=Danio rerio OX=7955 GN=rx1 PE=2 SV=2
P53544Homeobox protein goosecoid OS=Danio rerio OX=7955 GN=gsc PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45882PITUITARY HOMEOBOX HOMOLOG PTX1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

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