Gene detail

Detailed information of acyt_s0013.g9.t1 in Acropora cytherea

Genomic Location: sc0000013_pilon:156696...197431
NR annotation: XP_029192847.2, uncharacterized protein LOC114959111 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

acyt_s0013.g9.t1

ATGTCTGTGAAGATTTGGCTCTTAATTTTCATTGTTATTGCTAGTCCAGATAATATCTTGACATCTGCAGCATGTGTTGATCAGAATTCGAATTGTGACTATTGGGCGAGTATTGATGAATGCAATATAAATCCTCTCTACATGCTTTTTCGCTGTCCAGTCAGTTGTAATGTCTGCTCAGGTTGCCGAAACCTTCTCACTGACCAGTATTGTGTGGCGTTTACGCAGTATTGCAATACTAGCCAAGTTGTTTTGACAAACTGTATGAAGACATGCCGTGTTTGCAACTGTTGCCCCGCTCCAACCACATCGATATCAGTGTCAACCCAAGCAACAACTTTGGTAACTATATCGACAGCACCGTTGATGACAACACCGAGACCATTTCAAACCACTGAAAGTAAAACATTGCGAACATCATTGGCAACGACTCAGGCATCATTGGTAATAACCAATGTAACATCGTTGGCAGACACGCAAGCCACAGGTCAAACAGCATTGGAGTCAACAAAGAACATTTCTGGAAGGACGCAAGAGCGCACCTTGAGCCCAGATAATATCTTGACATCTGCAGCATGCGTTGATCAGAATCTGAGGTGTGCCCATTGGGCGAGTACTGGTGAATGCAATAGAAATCCTCTCTACATGCTTTTTCGCTGTCCAGTCAATTGTAACGTCTGCTCAGATTGCCGAAACGTGGCCACTGACCAGTACTGTGTGGCGTATGCTCGGTTTTGCAATGTTAATCAAGGTGTTTTGAGAAACTGCATGAAGACGTGTGTTTGCAACTGTTGCCCCACCCCAACCACATCAATATCAGTGTCTACCCAAGCAACAACTTTGGTAACAATATCGACAGCAACTTTAGTGACAACACCGAGAGCATTTCAAACCACTGAAAGTAAAACATTGGCAACGACTCAGGCATCATTGGCAACAACCAATGTAACATCATTGGCAACAACCAATGTAACATCATTGGCAACAACCAATGTAACATCATTGGCAACAACCAATGTAACATCATTGGCAGACACGCTAGCCACAGCTCAAACAACATTGGAGTCAACAAAGAACATTTCTGCAAGGACGCAAGAGCACACCTTGAGCCCAGGTCTGTTGGTACTCATTATTGTTGGAGTTCTGTTGATCGTCGGAGCCATTGGCCTCTCACTGTTTTGTGTTTGGCGAAGAAAAAAATCGCACCGCGCATCAAACAAGCCAAGAAGTTCTCCTCCTCCTTCAGCAGCATGTGTTGATCAGAATTCGAATTGCGACCATTGGGCGGGTATTGGTGAATGCAATACAAATCCTCTCTACATGCTTTTTAACTGTCCAGTCAGTTGTAACGTCTGCTCACGTTGCCGAAACGTGGTCACTGACCAGTATTGTGTGGCGTTTGCGCAGTATTGCAGTACTCACGAAGCTGTTTTGAGAAGCTGTATGAAGACATGCCGTGTTTGCAACTGTTGCCCCGCTCCAACCACATCGATATCAGTGTCAACCCAACCAACAACTTTGGCAACAATATCGACAGCAACTATGGTGACAACAACGAGAGTATTTCAAGCCACTGAAAGTAAAATATTGCCAATATCATCGGTAACGACTCAGGCATCATTGGTAACAGCCAATGCAACATCATTGGCAACAACCAATGTAACATCATTGGCAGACACGCTAGCCACAGCTCAAACAACATTGGAGTCAACAAAGAACATTTCTGGAAGGAGACAAGAGCGTGCCTTGAGCCCAGGTCTGTTGGTACTCATTATTGTTGGAATTCTGTTGATCATCGGAGCCATTGGCCTTTCACTGTTTTGTGTTTGGCGAAGAAAACAATCGCACCGCGCATCAAACAAGTCAAGAAGTTCTCCTCCTCCTTCAGTTCATAAAGAGGAGTCTATTTCCAATGCCACGAAAGGCCCTTCATATCACCAGCTTCAAAGACCAGACAACGCTTCCCCGAAAACTCACGAAGATTCTTCGGTCCAGTACGAGCAACCTGAGAACACCTTCCGATCAAATACCGACCTAGAGAATGCGTTGTATCAAGAGTCTTGGAATCCATCATATCTCCCATTCGAAAAATCGAACTGCAAGGAAGAGGAAGAAAGCCTAGATTACGCATACATCGACGTTGTTGCCGACGAAAAGGTTGTCTTGAAAGATAACAATTCGAGAAGAATGCGTAAAGACTGTCATGCATACGAAGCTCTGAACAAGCAAGATGCTGGTTTATACCAGGCCCTTGACGACATCtatgtagatcctaattatgatgatCAGCATGTTTTGATCAGAATTCGAATTGTGACTATTGGGCGACTGGTGTTGAATGCAATAAAAATCGCCGCTACATGCTTTTTAGGTGTCCAGTCAGTTGTAACGTCTGCTCACGTAAATAATATCTTGACATCTGCAGCATGTGTTGATCAGAATTCGAATTGTGACTATTGGGCGACTGGTGGTGAATGCAATAAAAATCCCCGCTACATGCTTTTTGACTGTCCAGTCAGTTGTAACGTCTGCTCACGTTGCCGAAACGTGGCCGCTGACCAGTTTTGTGTGGCGTATGCGCACATTTGCAAAAGCAACCTAGGTGTTTTTAGAAACTGTATGAAGACGTGTGTTTGCAACTGTTGCCCCGATCCAACCACATCGATATCAGTGTCAATTCAAGCAACAACTTTGGTAACTATTTCGACAGCACCGTTGGTGACAACACCAAGAGCATTTCAAACCACTGAAAGGAAAACATTGCCAACATCATTGGCAACTACTCAGGCATCATTGGTAATAACCAATGTAACATCGTTGGCAGACACGCAAGCCACAGGTCAAACAGCATTGGAGTCAACAATGAACATTTCTGCAAGGACGCAAGAGCGCACCTTGAGTCCAGGTCTGTTGGTACTCATTATTGTTGGAGTTCTGTTGATCATCGGAGCCATTGGCCTCTCACTGTTTTGTGTTTGGCGAAGAAAAAAATCGCACCGCGCATCAAACAAGCCAAGAAGTTCTCCTCCTCCTTCAGTTCATAAAGAGGAGTCTATTTCCAGTGCCACGAAAAGCCCTTTATGTCACCAGCTTCAAAGACCAGACAGCGCTTCCCCGAAAACTCACGAAGATTCATCGGTTCAGTACGAGAAACCTGAGAACACCTTCCGATCAAATACCGACCAAGAGGATGCGTTATATCAAGAGTCTTGGAATCCATCATACCTCCCATTCGAAAAATCGAACTGCAAGGAAGAGGAAGAAAGCCTAGATTATGCATACACCTACGTTGTTGCCGACGAAAAGGTTGTCTTGGAAGATAACAATTTGAGGAGAATACATGAAGACTGTCATGCATACGAAGCTCTGAACAAGCAGGATGCTGGTTTATACCAGGCCTCTGACAACATCTATGCAGATCCAAATGCTGCAAATACCGGAGAAAAGGATCCCAATTCCAGTTCTTACTTGTCGTTAAGTGACGCAACGAAATCATCTTATCAGCCTCTAAAGAAACTGGCTAGCAAATCTTCTTGA

Transcript

acyt_s0013.g9.t1

GAGTAGATTATAGGAGAGTGTAGCTGAGCAGTGCAGAGTAGATTATAGGAGAGTGTGGCCAAGCAGAGTAGAGTAGATTATAGGAGAGTGAAGCTAAGCAGAGTAGAGTAGATTACAAAAAAGTGTAGCTAAGCAGAGTAGAGTAGATTATAGGAGAGTGTAGCCGAGCAGAGTAGAGTAGAGTACAGGAGAGTGTAGCTAAGCAGAGTAGAGTAGATTATAAGAGAGTGTATATGAGCAGAGTAGAGTAGATTACAGCAGAGTGTAGCTGAGATGAGTAGAGTAGATTATAGGAGAGTGTAGCTAAGCAGAGTAGAAGATTATAGGAGAGGGGAGCTGAGCAGAGTAGATAAGATTATGGGAGAGTGGAGCTGAGCAGAGTAGAGTAGATTACAGGAGAGTGTAGCGTTATTTGCGAGTAACGACAATGTCTGTGAAGATTTGGCTCTTAATTTTCATTGTTATTGCTAGTCCAGATAATATCTTGACATCTGCAGCATGTGTTGATCAGAATTCGAATTGTGACTATTGGGCGAGTATTGATGAATGCAATATAAATCCTCTCTACATGCTTTTTCGCTGTCCAGTCAGTTGTAATGTCTGCTCAGGTTGCCGAAACCTTCTCACTGACCAGTATTGTGTGGCGTTTACGCAGTATTGCAATACTAGCCAAGTTGTTTTGACAAACTGTATGAAGACATGCCGTGTTTGCAACTGTTGCCCCGCTCCAACCACATCGATATCAGTGTCAACCCAAGCAACAACTTTGGTAACTATATCGACAGCACCGTTGATGACAACACCGAGACCATTTCAAACCACTGAAAGTAAAACATTGCGAACATCATTGGCAACGACTCAGGCATCATTGGTAATAACCAATGTAACATCGTTGGCAGACACGCAAGCCACAGGTCAAACAGCATTGGAGTCAACAAAGAACATTTCTGGAAGGACGCAAGAGCGCACCTTGAGCCCAGATAATATCTTGACATCTGCAGCATGCGTTGATCAGAATCTGAGGTGTGCCCATTGGGCGAGTACTGGTGAATGCAATAGAAATCCTCTCTACATGCTTTTTCGCTGTCCAGTCAATTGTAACGTCTGCTCAGATTGCCGAAACGTGGCCACTGACCAGTACTGTGTGGCGTATGCTCGGTTTTGCAATGTTAATCAAGGTGTTTTGAGAAACTGCATGAAGACGTGTGTTTGCAACTGTTGCCCCACCCCAACCACATCAATATCAGTGTCTACCCAAGCAACAACTTTGGTAACAATATCGACAGCAACTTTAGTGACAACACCGAGAGCATTTCAAACCACTGAAAGTAAAACATTGGCAACGACTCAGGCATCATTGGCAACAACCAATGTAACATCATTGGCAACAACCAATGTAACATCATTGGCAACAACCAATGTAACATCATTGGCAACAACCAATGTAACATCATTGGCAGACACGCTAGCCACAGCTCAAACAACATTGGAGTCAACAAAGAACATTTCTGCAAGGACGCAAGAGCACACCTTGAGCCCAGGTCTGTTGGTACTCATTATTGTTGGAGTTCTGTTGATCGTCGGAGCCATTGGCCTCTCACTGTTTTGTGTTTGGCGAAGAAAAAAATCGCACCGCGCATCAAACAAGCCAAGAAGTTCTCCTCCTCCTTCAGCAGCATGTGTTGATCAGAATTCGAATTGCGACCATTGGGCGGGTATTGGTGAATGCAATACAAATCCTCTCTACATGCTTTTTAACTGTCCAGTCAGTTGTAACGTCTGCTCACGTTGCCGAAACGTGGTCACTGACCAGTATTGTGTGGCGTTTGCGCAGTATTGCAGTACTCACGAAGCTGTTTTGAGAAGCTGTATGAAGACATGCCGTGTTTGCAACTGTTGCCCCGCTCCAACCACATCGATATCAGTGTCAACCCAACCAACAACTTTGGCAACAATATCGACAGCAACTATGGTGACAACAACGAGAGTATTTCAAGCCACTGAAAGTAAAATATTGCCAATATCATCGGTAACGACTCAGGCATCATTGGTAACAGCCAATGCAACATCATTGGCAACAACCAATGTAACATCATTGGCAGACACGCTAGCCACAGCTCAAACAACATTGGAGTCAACAAAGAACATTTCTGGAAGGAGACAAGAGCGTGCCTTGAGCCCAGGTCTGTTGGTACTCATTATTGTTGGAATTCTGTTGATCATCGGAGCCATTGGCCTTTCACTGTTTTGTGTTTGGCGAAGAAAACAATCGCACCGCGCATCAAACAAGTCAAGAAGTTCTCCTCCTCCTTCAGTTCATAAAGAGGAGTCTATTTCCAATGCCACGAAAGGCCCTTCATATCACCAGCTTCAAAGACCAGACAACGCTTCCCCGAAAACTCACGAAGATTCTTCGGTCCAGTACGAGCAACCTGAGAACACCTTCCGATCAAATACCGACCTAGAGAATGCGTTGTATCAAGAGTCTTGGAATCCATCATATCTCCCATTCGAAAAATCGAACTGCAAGGAAGAGGAAGAAAGCCTAGATTACGCATACATCGACGTTGTTGCCGACGAAAAGGTTGTCTTGAAAGATAACAATTCGAGAAGAATGCGTAAAGACTGTCATGCATACGAAGCTCTGAACAAGCAAGATGCTGGTTTATACCAGGCCCTTGACGACATCtatgtagatcctaattatgatgatCAGCATGTTTTGATCAGAATTCGAATTGTGACTATTGGGCGACTGGTGTTGAATGCAATAAAAATCGCCGCTACATGCTTTTTAGGTGTCCAGTCAGTTGTAACGTCTGCTCACGTAAATAATATCTTGACATCTGCAGCATGTGTTGATCAGAATTCGAATTGTGACTATTGGGCGACTGGTGGTGAATGCAATAAAAATCCCCGCTACATGCTTTTTGACTGTCCAGTCAGTTGTAACGTCTGCTCACGTTGCCGAAACGTGGCCGCTGACCAGTTTTGTGTGGCGTATGCGCACATTTGCAAAAGCAACCTAGGTGTTTTTAGAAACTGTATGAAGACGTGTGTTTGCAACTGTTGCCCCGATCCAACCACATCGATATCAGTGTCAATTCAAGCAACAACTTTGGTAACTATTTCGACAGCACCGTTGGTGACAACACCAAGAGCATTTCAAACCACTGAAAGGAAAACATTGCCAACATCATTGGCAACTACTCAGGCATCATTGGTAATAACCAATGTAACATCGTTGGCAGACACGCAAGCCACAGGTCAAACAGCATTGGAGTCAACAATGAACATTTCTGCAAGGACGCAAGAGCGCACCTTGAGTCCAGGTCTGTTGGTACTCATTATTGTTGGAGTTCTGTTGATCATCGGAGCCATTGGCCTCTCACTGTTTTGTGTTTGGCGAAGAAAAAAATCGCACCGCGCATCAAACAAGCCAAGAAGTTCTCCTCCTCCTTCAGTTCATAAAGAGGAGTCTATTTCCAGTGCCACGAAAAGCCCTTTATGTCACCAGCTTCAAAGACCAGACAGCGCTTCCCCGAAAACTCACGAAGATTCATCGGTTCAGTACGAGAAACCTGAGAACACCTTCCGATCAAATACCGACCAAGAGGATGCGTTATATCAAGAGTCTTGGAATCCATCATACCTCCCATTCGAAAAATCGAACTGCAAGGAAGAGGAAGAAAGCCTAGATTATGCATACACCTACGTTGTTGCCGACGAAAAGGTTGTCTTGGAAGATAACAATTTGAGGAGAATACATGAAGACTGTCATGCATACGAAGCTCTGAACAAGCAGGATGCTGGTTTATACCAGGCCTCTGACAACATCTATGCAGATCCAAATGCTGCAAATACCGGAGAAAAGGATCCCAATTCCAGTTCTTACTTGTCGTTAAGTGACGCAACGAAATCATCTTATCAGCCTCTAAAGAAACTGGCTAGCAAATCTTCTTGAAAAGACTAATTCGGTCAAAAAAAGGACGCAAATCTTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01549	ShK	ShK domain-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003582	Domain	ShKT domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11070	potC; spermidine/putrescine transport system permease protein	-	Transporters	ko02000	deepkoala