Gene detail

Detailed information of acyt_s0023.g32.t2 in Acropora cytherea

Genomic Location: sc0000023_pilon:448885...460028
NR annotation: XP_044172463.1, alkylglycerol monooxygenase-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0023.g32.t2

TTCTAATTGGTTGGTGGTAACGGATGCCTATTCCAATTATCCCTGTATTCATCAAACCAGTTCCACGTCTTCCAAAGCTGCGATCGATTTGCTGGAGGAGGACTTTGCACATTTCGGGTTACCCGCATACCCTGGTATCGGATAATGCGACGACTTTCACATCAGAAGAATTTCAGGAATGGTGCAAGTCAAGAGGGATTATGCACCTGACAGGAGCGCCGTATCACCCAGCAACTAATGGGGCAGCTGAAAGGCTGGTCCAGACGTTCAAAAGTTCACTGACGAAGTCGGCAACACCAACCAAAGTTTCTCTTCAGTGTTTCCTCATGCAGTACCGGAGAACACCGTTGCTTTGTGGCTATTCTCCTAGTGAGCTTTTGAATGGTCGTCAAATAAGGACGGCCATAGATGTTCTTATTCCGTCTCCTGCACACCAGGCTCAGGAGCGTCAGAGCAAGCAAGCTGCAAAGGCTGTGCAAAGACTAGCAGGCCGGTCAGGTCCTCAGTACCGAGTTGGCACTCCTTGCTATGCTCTCTATTGCGGTCCGCATCGAGACAAAGACCCACGATGGGTACCTGCTGTGGTCACCAAAGTACGTGGAGCTCGATCTGTCTGTGTCAGAGTCTACCCAAGGGGACCAATATGGCGGAGGCATGTTGAGCAGCTATGTCCAAGATACATCTCAGAAGAGGACATGGAGCCAGGTGAAACCCCAAGTTCATCAGTTGAAAGGGGACATCTTGCAAATGGTGGAGTGGAGGAAGCTTCTCCAGAGAAGAAAGACAAAGAATCAAGCAATGCGGAGACAACAGTTCAAAGGAAACGTCGAAACCCTAGGATGCCAACTGGTAACGGAGTTATTATTTTGGTTGGAGTTATGACTCTCTATGTGTTTGTTTACAACAAGTTTTGTTTGGCAAATTTGCCTTGGGGTCATCCTGGAACATGGTATTTTTGCTTTATTGGAGTGGACTTTCTTTATTACTGGTTCCATAGAGCTGCTCATGAAGTCAACATTATGTGGGCAGCGCATCAAGCACATCACAGCTCTGAAGACTACAATCTCACAACAGCTTTGAGGCAATCTGTGGTGCAGAATTACACGTCTGCGATATTTTATGTACCTTTGGCTTTGATAGTGCCTCCTTCCATTTTCCTTATCCACTTCCAATTTAGTCTACTCTACCAATTCTGGATTCATACTGAGATTGTGCGCTCACTTGGTCCTTTGGAATACATTTTTAATACTCCAAGTCACCATCGTGTGCATCATGGAAGAAACCCATATTGCATTGATAAAAACTATGGTGGAACCTTGATTATCTGGGACAGAATTTTTGGAACATTTCAGGCCGAGACAAATGAAAAGATTGCCTATGGTCTGGTTCACCCTCTGGCCAGCTGGGATCCATTTTGGACACAGGCTTGTCATTTCACTCACATTTGGAAGACATTTTGGGAAACGCCAGGTACAATGAACAAGTTGTCCGTAATTTTCAAAGGACCTGGTTGGACCCCCGGAAAGCCTCGTTTGGGTGACCCAGGGGACATTCCAGAGGTTGAGAATCCCATTCGGAAATATGACAGCTGTTTGTCTTCTTGGGGCAATCTATATATGTTAGTGCATTTCGTTGTTGCCATCGTAGCTTATCAAATGCTGATTGCACGAAGAATGGTTTTGAGCGAATTACACGTCGTTGGAGTTGTTTCATATTTTCTCTTCACCATTTCAAGTATTGGTGCACTTTTCGATAACAAGTGGTACGCGCCCTACATGGAGTTGTTCCGCTGTATCCTGTTCCTTGCTGTTGATGTTATCCTTTCAGTACAAAATCTCGACACTGGTGTGTTTCCTAGAAATTACATTGACGCCGTCAGGGGAATCTTTATCGCTTCTGCTTTTGTTTGGATCAGCGGCTCGCTAGCGTCGACGAAAAAGTTCAGAACTGAATAAACTGGGAACGGAGGACAGCGGTCAACTTTCTCTGACTTGGACGCGACTCATGGTCTCTCATGGTTCTATTTTGCGAATGACGAAGGACTATTCGCAGGAGCCCGATTCTAAATCCAGTCAGTGACATATTTAGGCAGCCAGCCCAATCTCATGCTGATCAGTTACATACCAAGAACAATTATTTTATACATTTTATAGGAAATTGAACATTTTGAGAAAAAATGATTAAGTGATGGTCGCATATAGAGTAAATTATACGTTAACTT

Protein

Uniprot

Uniprot term	Description
Q8BS35	Alkylglycerol monooxygenase OS=Mus musculus OX=10090 GN=Agmo PE=1 SV=1
A0JPQ8	Alkylglycerol monooxygenase OS=Rattus norvegicus OX=10116 GN=Agmo PE=2 SV=1
Q5M8F9	Alkylglycerol monooxygenase OS=Xenopus tropicalis OX=8364 GN=agmo PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04116	FA_hydroxylase	Fatty acid hydroxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR006694	Domain	Fatty acid hydroxylase	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR051689	Family	Sterol Desaturase/TMEM195-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21624	STEROL DESATURASE-RELATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0008610	Biological Process	lipid biosynthetic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006643	Biological Process	membrane lipid metabolic process	Interproscan
GO:0050479	Molecular Function	glyceryl-ether monooxygenase activity	Interproscan