Detailed information of acyt_s0024.g116.t1 in Acropora cytherea

Genomic Location: sc0000024_pilon:1795515...1814515
NR annotation: XP_044179723.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114955279 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P48754Breast cancer type 1 susceptibility protein homolog OS=Mus musculus OX=10090 GN=Brca1 PE=1 SV=3
Q6J6I8Breast cancer type 1 susceptibility protein homolog OS=Gorilla gorilla gorilla OX=9595 GN=BRCA1 PE=3 SV=1
P38398Breast cancer type 1 susceptibility protein OS=Homo sapiens OX=9606 GN=BRCA1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR031099FamilyBRCA1-associatedInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0031436Cellular ComponentBRCA1-BARD1 complexInterproscan
GO:0035066Biological Processobsolete positive regulation of histone acetylationInterproscan
GO:0035067Biological Processobsolete negative regulation of histone acetylationInterproscan
GO:0045717Biological Processnegative regulation of fatty acid biosynthetic processInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0070531Cellular ComponentBRCA1-A complexInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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