Gene detail

Detailed information of acyt_s0024.g118.t1 in Acropora cytherea

Genomic Location: sc0000024_pilon:1845771...1850029
NR annotation: XP_044167010.1, uncharacterized WD repeat-containing protein alr3466-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
O48847	Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1
D4AZ50	Nuclear distribution protein PAC1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=PAC1 PE=3 SV=1
D4DG66	Nuclear distribution protein PAC1 OS=Trichophyton verrucosum (strain HKI 0517) OX=663202 GN=PAC1 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR011044	Homologous_superfamily	Quinoprotein amine dehydrogenase, beta chain-like	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19846	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0017070	Molecular Function	U6 snRNA binding	Interproscan
GO:0030621	Molecular Function	U4 snRNA binding	Interproscan
GO:0046540	Cellular Component	U4/U6 x U5 tri-snRNP complex	Interproscan