Gene detail

Detailed information of acyt_s0025.g62.t1 in Acropora cytherea

Genomic Location: sc0000025_pilon:841626...843763
NR annotation: XP_029213278.1, transcription factor AP-1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0025.g62.t1

AAAAGTTGCGTTTTGCTGTAATCACGAGCGGTGTAAAACGTTTGAGTCAGCTGATTTTTGTTCAATTTCAAACAAAGTTATTTTGTGAATGGAAGCATCATTGTACGACGAAGAAATTATGCCGACAACATCAAATTCACAAAACTCATCTTACGACAAAGGCAATTTGAAGCTTGATTTTACATCAACGAACCCTCGGCGACAGACGTCGATCGAAGGGACAGTTCTTACATCACCAGATTTAAATTTGCTGGCTTTGGGTTCTCCCGAACTGGAGAAATTAATCGTCAGCTATGGAGGCATTCTAACAACACCAACGCCAGGTCAGTTATTCAAAGGAACAGTCTCTGTCACAGAGCAGCAAGAAATGTATGCGCGCGGCTTTATGGAAGCTCTTCAAAAGCTTCATGAACAGCAAGGCATTGCAAGTCAAAACACAACTATAGCGTCTGCACAAAATGCTCCAAGCCCTTCTCTGCTTAGTACCCTTAACGTGCAGCTTGCACCAGCGAATGGATTGAACACCGCAACTAGCACGATCGCCAATGCAACTCCTATGATGTGTACTGGAACATCCACGATCTCAACACAGTCACTTCCGTTGGTGTCGCTACATGCAGCCGGAGCCAGCCAAATTTTTCCCGATTTTCAACGAGCTGCGGCTCGTCAGATTGATCCTAGTACAAGTTTAAGTCAGATATTGAATTCTGAAATACCATCGCAACGATTAGAGAGTGTAAACATCGAAAGTGTAGAGCCTCAAGTTGTTCCAGGAACTCCACCGCTTCCTCCAATCGATTTGGCGTTACAGGAAACTGTgaaaaacgaacgaaagaaacaaagaaaTCGTGTTGCTGCGTCTAAATGCCGAAAGAGAAAACTTGAAAAGGAAGCAGACCTTCAGGTGAAAGTGGACGAACTGAAAGACATTAACACCAAGCTCCACACCGAAATTAGCGACCTAAAGAAACAGGTGAGCAATTTGAAGCTGCAAGTTATGGAACATGTGCATGGAGGATGTGAAATCATGTTGTCGAATCAACCGTAGGACAAATCCACATTGCAGAAGCTTGAATATGGGTTTTTCCTTAAGAACTGTTGCCTTAAAGTTTGAGATCAGGATCTGATGAAATCTTTGTATTTTGAGGAACTGCGAAAGCGTAACTGAACGATCGAGTGAGCACGTGCGTCAAACGTGAAAAACTGAAATGCAAAACATAGAAACGAAAATAAGGTTAGAAAATATGACTGCCAATAGTAGTCGCTCAATGGCTCGAATGCGAGTTATGTTATCCAGCTGGACCTGAGAGTATAATGTAATGGGTCAACGAAGTTCCTATACGAGTGAAAATTGTGAGATTTCGAGGAATATTTTTCCTTTTCTTCGAAATAACTAGACAACTCTAAACGCAGGACGTTACAAACACATAATATTATCCCTTTGTGAGGAATTAGTCGAGCCAAGTAGTCATTGAACGACGTTGTTAAGTAATAAAACCTGGAAAAATTCAATATGATATTTACAGATGTTGGAATGTTACGAGATGTTGTGTTTGAAATGTCAATTAACTTGGCCTATTCGAGGTCAATACCGCGGTTATTTAGATCTTACAAATGATATTTATTGAGTTAACTTAGGATGTAACATTTTAGTGCTCGATGTGGAGGCAATTTAAGAAAATAATGTCAGATCTCTAAAATCGTGGCCGTCACATATGCATGTTGTGATTGCAGGTAATAAATGGGGTAAAATCTTATAGCTGATCTGTTAAATTCAAATAATCGAGAACTGTACAACAAGCTTGTCTCAGTTATGTACCGGTGTCAACAAGTCGTTGAGTTAAAACTTAAAAAAAATTGTAACACTTGTTTAGTTGAAGCTACATTTTTGAGGAGATCACTATGGTAGGAAGTAAAACATGTTAATAATATATTCCCCTTGAAGATTAAAAAAGGTTGCCTTGATCAGTGTGAATGCTTGATTATTTTGCAATTTAGCCAAGGAAGGAGAAAGTGAACTAAAAGGTGGTTTCTTGGTAGATTACCGGGGGGTTTTCCCTGCAAACTTGGTTTCTATTCCTACAATTAAGAAAGCCACAAAACAAGAGAAACTGATGAATTAAAATTTGAATTTCCTA

Protein

Uniprot

Gene family

Uniprot term	Description
P05412	Transcription factor Jun OS=Homo sapiens OX=9606 GN=JUN PE=1 SV=2
P05627	Transcription factor Jun OS=Mus musculus OX=10090 GN=Jun PE=1 SV=3
O77627	Transcription factor Jun OS=Bos taurus OX=9913 GN=JUN PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00170	bZIP_1	bZIP transcription factor	Coiled-coil	Interproscan
PF03957	Jun	Jun-like transcription factor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR005643	Domain	Jun-like transcription factor	Interproscan
IPR050946	Family	AP-1 Transcription Factor bZIP	Interproscan
IPR002112	Family	Transcription factor Jun	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11462	JUN TRANSCRIPTION FACTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0042127	Biological Process	regulation of cell population proliferation	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04448	JUN; transcription factor AP-1	-	Transcription factors	ko03000	deepkoala