Gene detail

Detailed information of acyt_s0026.g2.t1 in Acropora cytherea

Genomic Location: sc0000026_pilon:3566...11411
NR annotation: XP_015750236.1, PREDICTED: uncharacterized protein LOC107330103, partial [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00929	RNase_T	Exonuclease	Family	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR040393	Family	Three-prime repair exonuclease 1/2	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13058	THREE PRIME REPAIR EXONUCLEASE 1, 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0000738	Biological Process	obsolete DNA catabolic process, exonucleolytic	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008296	Molecular Function	3'-5'-DNA exonuclease activity	Interproscan
GO:0008408	Molecular Function	3'-5' exonuclease activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02342	dnaQ; DNA polymerase III subunit epsilon	EC:2.7.7.7	DNA repair and recombination proteins	ko03400	deepkoala