Detailed information of acyt_s0029.g117.t1 in Acropora cytherea

Genomic Location: sc0000029_pilon:1682416...1688415
NR annotation: XP_029188238.2, multiple epidermal growth factor-like domains protein 10 [Acropora millepora]
Species abbreviation ACYTH · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006040 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13403
all species →		Hint_2Hint domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028992
all species →		DomainHedgehog/Intein (Hint) domainInterproscan
IPR006141
all species →		PTMIntein N-terminal splicing regionInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR036844
all species →		Homologous_superfamilyHint domain superfamilyInterproscan
IPR050906
all species →		FamilyNotch signaling pathwayInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044
all species →		NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016539
all species →		Biological Processintein-mediated protein splicingInterproscan
GO:0005112
all species →		Molecular FunctionNotch bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for acyt_s0029.g117.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP