Gene detail

Detailed information of acyt_s0038.g30.t1 in Acropora cytherea

Genomic Location: sc0000038_pilon:805153...850020
NR annotation: XP_044176509.1, uncharacterized protein LOC114976089 isoform X16 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0038.g30.t1

CCAAGCCCCAAGATTGCGAGAAGTACAACAGAATGAAGGATTTGAGTCACGCAGTGCCCACTTCCACTTCACAAGGATCTCTTACAGAAATACCTCACGCTGGTGGATTTAAAGAGTCAGTGCCAGATATTAACGCTCTCCCAAAGGATTTCAGTGGACAACCACACAGAACTGAACAGAAAAAAGCTAACGAGAGTGCAAGAATGAATACGCTTGATAACAAAGATGTTCAAGATTATTTGTCTGACACGACTGCTGGAAAAGggttagacgggtcatggaaaacctggaaagtcatggaataacatttgttggacatgctactctagattgacatcttgatggcatcttttgtgagcaaagtacaagtcaccattttggcttctgagtggagatccagtaaaggagggctttccaccataaacagagagctggccattcaattagccagattttcaagtttggaagtcactctctttttgcccaaatcctctgacgaggacaagaaagcagctgaaagccatggcatttccattgttctggcaacgagacgaccaggttacgaggaactggactggctcagctttgcaccagagcatttgatgatagatgtaattgttggtcatggagttaaacttggtcgccaagcccaattcatccgtgagtctcacaaatgcaagtgggttcaagttgtacacactgacccagagcaactaggaatgttcaaatgttacgataatccaatctcaacaggagaaaaaaagcgttatgttgaggtagagctatgccagatggctgattttgtcgtaggaattggacccaagctggctgagacctttcgcaagtaccttggcttttgtaaaaagcaccaagatgtttatgagtttactcccggaattttttatgacttttccggtgttcaacaagttcctaataaaagaaaatggtgcagtgttttggtttttgggcgtggagatgatgaagattttgagctgaagggatttgacattgcagcaaaatctgttgctgccttgtctgacactattcttgttttcgtgggagcaccccatggaaaacatgaggagattgccaagcgcttcattgattttgggattcctgcaaaccgtctgcaggtgagaggttacatagatagccgagaagatctaaagcggttattttgtgaggtggatcttgtgctgatgccatcaaggacagaagggtttggcttgacaggtctagaagcactgtcagctgggcttcctgtaattgtcagcaaaaactctggttttggagaagctctggttagcatacaaggtggttctacctttgtcatagacactgaagatcacggcgcatggaaagaggctatcaaagacatctgggataaagacagaaagtcacgacttgatgaggttaagactttgcgtggttcctacagtgagagatacagttggcgtaaacagtgcaaggatcttattgataaatggcttgaacttcttgatgaaacttcgtccaaccctgagatcacagcacaggcaatgaaagcatggaagcagaatgggaataaggactttgcagGAGCACAAGGTGGACCTGGGAAGAAACGTTCCTTTAGTGACCACCAAGAAATATTTACCCGTTTATCCTGTGTTTCTAACAGTAATGAGACTTTGCCAAGAGAGGGTCCAGATCAGCCTGAAGAAGTTTCGGCAGGTGGTACTGAGGAAATGAGGCCCAGAAGTAACGCAGTTTCACGCAAATACAGGAAACCACCCATCCACACCGTTAGGCAGGAGAATCCAGATCAACCTTCAGGGTACATAAGGCTAGCACAGGTTTTTGAGAGTTCTTTCCCTCTAAAAACGATTGTGGAAGATCTACTTGAGAAGGAAACCAATACATACGGAAAAAACATGCAAACATGTCACATTCAAGTACAGGATGTACAATATTGATCGCGTTGAAAGATGGAAAAATCCAGGAGCAGAGGTCTTTTGCTATCTTGAATCAACCCATCCAAACTTAACTGTTTACCCCTTCTGCAAGGAACTCAAGGACGAAAATATAAGACGACTTGATGTTGTAAATAAATTGGTTGATCGTCTTATCTGCATGAAAGACCGTAACGATGCAAAGGCTTAATTGATATTATCGAAGAGAAATGATTTCTATTATTAAGATACAGATGACACCATATTCTTGTCATAATGTCATTGGTAGGACAAGTTACATTATGGTACGTCTGCTTAGGAGGCTTCTTCGCTAGAGAAGCAAATTCGTTTAGAAAACTATATTTTCAAGTTTTTTCTTTTGTACAGTTCATTACAAGCACATGACCGTCTTATTCATTATCCAGCATTCGTTGTAAGCTACATCAGTTGAAAATGAAGAAATAAGCAAAGCTTGTTGACTTACGTGAGTGACATGCTAGCTTCGGTATTTAACCACTTTTTGATGAATGAAGATATTTTTCTAAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
PTHR46401	GLYCOSYLTRANSFERASE WBBK-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009103	Biological Process	lipopolysaccharide biosynthetic process	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan