Detailed information of acyt_s0038.g53.t1 in Acropora cytherea

Genomic Location: sc0000038_pilon:1323375...1361319
NR annotation: XP_029212286.2, transcription initiation factor TFIID subunit 1-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80UV9Transcription initiation factor TFIID subunit 1 OS=Mus musculus OX=10090 GN=Taf1 PE=1 SV=2
Q60544Transcription initiation factor TFIID subunit 1 OS=Mesocricetus auratus OX=10036 GN=TAF1 PE=2 SV=1
P21675Transcription initiation factor TFIID subunit 1 OS=Homo sapiens OX=9606 GN=TAF1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12157DUF3591Protein of unknown function (DUF3591)FamilyInterproscan
PF00439BromodomainBromodomainDomainInterproscan
PF09247TBP-bindingTATA box-binding protein bindingDomainInterproscan
PF15288zf-CCHC_6Zinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001487DomainBromodomainInterproscan
IPR022591DomainTranscription initiation factor TFIID subunit 1, histone acetyltransferase domainInterproscan
IPR036741Homologous_superfamilyTAFII-230 TBP-binding domain superfamilyInterproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan
IPR040240FamilyTranscription initiation factor TFIID subunit 1Interproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR009067DomainTAFII-230 TBP-bindingInterproscan
IPR041670DomainZinc knuckleInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13900TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004402Molecular Functionhistone acetyltransferase activityInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan
GO:0051123Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03125TAF1; transcription initiation factor TFIID subunit 1EC:2.3.1.48
EC:2.7.11.1
Chromosome and associated proteinsko03036deepkoala

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