Detailed information of acyt_s0038.g55.t1 in Acropora cytherea

Genomic Location: sc0000038_pilon:1367074...1394779
NR annotation: XP_044176444.1, LOW QUALITY PROTEIN: uncharacterized protein LOC122959284 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9QXG2Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus OX=10090 GN=Chm PE=1 SV=1
P37727Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus OX=10116 GN=Chm PE=1 SV=1
P24386Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens OX=9606 GN=CHM PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF20706GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF00996GDIGDP dissociation inhibitorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001738FamilyRab protein geranylgeranyltransferase component AInterproscan
IPR018203FamilyGDP dissociation inhibitorInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11787RAB GDP-DISSOCIATION INHIBITORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005968Cellular ComponentRab-protein geranylgeranyltransferase complexInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0018344Biological Processprotein geranylgeranylationInterproscan
GO:0005092Molecular FunctionGDP-dissociation inhibitor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP