Detailed information of acyt_s0040.g109.t3 in Acropora cytherea

Genomic Location: sc0000040_pilon:1683998...1709516
NR annotation: XP_029210705.2, bromodomain adjacent to zinc finger domain protein 1A-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B4G9L6KRR1 small subunit processome component homolog OS=Drosophila persimilis OX=7234 GN=dbe PE=3 SV=1
B4N0P7KRR1 small subunit processome component homolog OS=Drosophila willistoni OX=7260 GN=dbe PE=3 SV=1
Q3B7L9KRR1 small subunit processome component homolog OS=Bos taurus OX=9913 GN=KRR1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF21800KRR1-like_KH2KRR1 small subunit processome component, second KH domainDomainInterproscan
PF17903KH_8Krr1 KH1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001487DomainBromodomainInterproscan
IPR004087DomainK Homology domainInterproscan
IPR048548DomainKRR1 small subunit processome component, second KH domainInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR048550DomainKRR1 small subunit processome component, first KH domain, eukaryotesInterproscan
IPR041174DomainKRR1 small subunit processome component, first KH domainInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR048549DomainKRR1 small subunit processome component, second KH domain, eukaryotesInterproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan
IPR024166FamilyRibosomal RNA assembly KRR1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12581HIV-1 REV BINDING PROTEIN 2, 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

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